LOCUS LJ629317 1546 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67663.graph_c0_seq3.
ACCESSION LJ629317
VERSION LJ629317.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1546)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1546
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67663.graph_c0_seq3"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 463 a 283 c 297 g 503 t
ORIGIN
1 ttcctgcaca gtctgcctca tttaaatctg tctttgggtt ggatcgctct agtcggcgtt
61 ttactgcttc taatattggc cgatagtgag gatttcgacg gtctcatggc acgcgttgaa
121 tggagcacct tgctattttt cgcatccttg ttcattctca tggaggctct ctcgcgtttg
181 ggcctcatca cgtggattgg tcaaagaact gagtatttca ttttgtcggt caacgaggag
241 tctcgattag cggttgctat attgttgttg ctctgggtat cagctctggc tagctgcttc
301 gtcgacaacg taccgctcgc taccatgatg gtgagaatcg ccacgaatct cgcccaaaat
361 cgtgaactcg atttgcctat gcagcctctg atatgggcac tgacgttcgg ggcttgtatg
421 ggaggaaatg gaactttgat tggagctact gccaacgttg tttgcatggg cgtcgcggag
481 caacatggtt acagattcag tttcatgcaa ttcttcaggg taggatttcc tatcatgcta
541 acgagtacca taacaattat ggtttatctg ataattgctc acgtcgtctt cggttggaac
601 ggaacataaa taacaaggac gtatgagtga ggatctgttt aatgtacaat ggtacttgta
661 ctcataaata tgtacttatt acataacttt tttaagagca gaatattcat tacgcaaaat
721 tactgaacat ggttccgtaa aatattatat agagagcaca aatcaatatg gacaaagtcg
781 ttttacacat ttccaatatt tttacatgta tttgtatgaa actgctgcag aaaaaaagaa
841 atctgtatat aactgcttgt aatacggccg aactttttta ttcttctccc aaatcttgtt
901 cttattctaa tgacacacgc gtgtaagata aaaaagttgc gtattttgtc tttcattcgt
961 ttgttttgta aggaaactat gcatgtggcc acatggtcac gtggcgaata tgcaacggag
1021 aaagcactaa agaagaattt caatttatag gggacagcta tttctgtgaa tagaagagtt
1081 ctgctgtacg taaactcaca agcaatcgta taataatgtt gtattatata tttataagtc
1141 tcacttgcaa aataaatatt gtttcctcaa agactcttgt tatttgctgg cccttaatga
1201 tgaaacacaa taacattaaa ttttaatata aaaaaattaa aattggcaaa ttgcgcgtaa
1261 ttgcgtaaag gtttaatgat cacataaaat acacatacat gctagacaat tcgttgaaat
1321 atttttatta aaaatgaggt tctctggaag aagagaaaaa tatccaaagc ttatcacgtg
1381 gcatcgccaa cttcctcaaa atcaaataat ttatcgcaaa cttatactta tattgttcgt
1441 aattgtgtgc ctcgcaattc agtgcaatac aatcgcattt ggatcaaatc actgaaatta
1501 aaatatctta tttcaatatc tcacacgcaa aatcagtatt ctaata
//