LOCUS LJ628462 927 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68034.graph_c1_seq24.
ACCESSION LJ628462
VERSION LJ628462.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 927)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..927
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68034.graph_c1_seq24"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 334 a 128 c 161 g 304 t
ORIGIN
1 ttgcgatgtc atgagtttat gcaggtatgt agctggcaca ttacatatag tccagacatc
61 tagattaggg aaggaaattt aatatttacg gagatgaacg tttttgatgt ttcgtagagt
121 atttttaaag tacccggatc actgcctggg aatacaataa caaaactaag agcaaagatc
181 atgcaacaac atataaaacg aaagcaagat aagctggaac gatagtatta atggccaact
241 ttttccatat atacaccgaa atattctagt ctgttatgtt attcatttgc attttttttg
301 caaaatgaat gcatataaag ctgtattata ttgttattgc ataatgattc tattgctgta
361 catattgggg agggtgaggc aataaggtag ttaaaattta atgacgaata aaagctatgt
421 tttcataatt aacgaatcat ttttacttgt aaaatatttt tgggataatc atctttgaac
481 ataactataa ttttaaaaaa tctttagaaa attataaact ttatttaaga aaaataaaaa
541 gggagcattt ctccacatct atcctatggt aagacaagat attcctgaag acgagatagc
601 atacatttta aaaacataaa tacaaagtag aaagtgaatc attttatcct tgttttatcg
661 ttgtcaatat taaataagaa tgaaattatg cactttgttg cattgtagcc ttctgtgtct
721 cttgctggaa aatagcttca tttagcagac aataaatatt ctcaattcat tcatcagcgc
781 gtaatgtcat actttttaca aatgaagtta acagacatga gtctacttga gtaccattcg
841 attgttcata ttgttaacat agacatagga tctatagacc gagcattcga ggagtgggga
901 cgtgaaaaac tagaaagaga cagcaag
//