LOCUS LJ628450 2411 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68034.graph_c1_seq12.
ACCESSION LJ628450
VERSION LJ628450.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2411)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2411
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68034.graph_c1_seq12"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 853 a 369 c 421 g 768 t
ORIGIN
1 ggcacacgat cgtagatctc tccgacattc acagagttgc gtagggcatg gcaagttcat
61 gcttcagtga tgtggacgaa tatggtttcg aacgaccgca cgacttcgat tatgaaacgt
121 acgaagattt tatgtccgag tacctcaagg tgctcgcaaa gatggccaaa aagtgggcga
181 aaattatcgg cgagggaaaa tccctacagc gaagcattac gctcaaaaga tacgttcgta
241 aaggcattcc aggagaatat agaggattgg tttggcttgc tgtgagtggt ggagaagaca
301 tgaaaaatgc atcgccggac ctttatcaaa aattactgct atctccccac aatgcagaaa
361 ccgttgagat tattaaaact gatctcccaa gaacatttcc agacaatata ttctttaata
421 acacggagaa tcagcagcat caattataca atgttttatt ggcttttgct catcaaaaca
481 aatctattgg atactgccag ggtttaaatt acatagcagg tttacttttg ctggtaacaa
541 aaaacgaaga gacagcattt tggttactaa aagtgttgat tgataaaatc ctaccagatt
601 attatacatg cactatggat ggcctactca ctgacatcga cgtactcgca gaattagtaa
661 ggtaaagcag aatttataca ataataattt gatttgtcag caatatttgt gcacatgctt
721 atacattata tttacagaat aaagatgcct gatgtgtatc agcatgtaac aaacgtggga
781 ttgccttggc cagtaattac gactaagtgg tttgtgtgtt tatttgctga agttttacct
841 atagaggtat gtaaataatc atacattata tacatgtcga ttaggtgctt tccacttagt
901 aacacaaatc gatacaatcg ttgttctatc tttgactgtt tttcaacaag gtaacagata
961 gcagtgtaac actgcttgac actgtaaaaa gttaaatcga gtgtcaatcg taaaatatgt
1021 cagtgtcatc aacttttcaa aatattttat ttaacatacg ctaattatgt tcatttgtaa
1081 tatgaatata atctaagtat agaaaaagaa gattagttat taatgtatca gaaattaaat
1141 ttagagatct aattgtgttt caacaaaaat tttatacagt atatcagtgt attctagcta
1201 gaaaacagct tttgttagtt attaaatacc aaaaaagtta gaacaatgtt tgtgtcacta
1261 aatggaaagc attctataaa ttattaagac attgaataat ttttcatata ataacatttg
1321 aatatatgca aacatgccaa ttattttgaa tataaaatat ccaaatattt tggctgcaaa
1381 aaaggtaaga gtagtacatg tcctcaaatt cacagactac tctgcgtatt tgggattgtc
1441 ttttttacga aggcaccaag attatcttcc gtgttgcatt gacactcata aaaaggaata
1501 aatctaatct attagcttgt caagattttg caacattagc cgaatgtttt aaagaaatta
1561 caaaagacag tattgtttta cgatgtcacg agtttatgca gagtattttt aaagtacccg
1621 gatcactgcc tgggaataca ataacaaaac taagagcaaa gatcatgcaa caacatataa
1681 aacgaaagca agataagctg gaacgatagt attaatggcc aactttttcc atatatacac
1741 cgaaatattc tagtctgtta tgttattcat ttgcattttt tttgcaaaat gaatgcatat
1801 aaagctgtat tatattgtta ttgcataatg attctattgc tgtacatatt ggggagggtg
1861 aggcaataag gtagttaaaa tttaatgacg aataaaagct atgttttcat aattaacgaa
1921 tcatttttac ttgtaaaata tttttgggat aatcatcttt gaacataact ataattttaa
1981 aaaatcttta gaaaattata aactttattt aagaaaaata aaaagggagc atttctccac
2041 atctatccta tggtaagaca agatattcct gaagacgaga tagcatacat tttaaaaaca
2101 taaatacaaa gtagaaagtg aatcatttta tccttgtttt atcgttgtca atattaaata
2161 agaatgaaat tatgcacttt gttgcattgt agccttctgt gtctcttgct ggaaaatagc
2221 ttcatttagc agacaataaa tattctcaat tcattcatca gcgcgtaatg tcatactttt
2281 tacaaatgaa gttaacagac atgagtctac ttgagtacca ttcgattgtt catattgtta
2341 acatagacat aggatctata gaccgagcat tcgaggagtg gggacgtgaa aaactagaaa
2401 gagacagcaa g
//