LOCUS LJ627155 1031 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67478.graph_c0_seq1.
ACCESSION LJ627155
VERSION LJ627155.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1031)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1031
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67478.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 368 a 175 c 201 g 287 t
ORIGIN
1 agaaggatta gtaagggacg tcacaagacg ctactgtcca cagtggattt ctgtcacacg
61 taagcagcgt attgatgaga aatggtggat tgagacttta agttattggc aagaaaggga
121 gacggctatg tctaaacagg aagatgaatt actattacaa aaggaactgg agcagccgtt
181 acctaaaacc gttagcgaat gcaaagggca tccgttatat gttctcgtca ggcacctact
241 taaatacgaa gccctatacc caccagattg tgtaccatta ggacatttga aaacgggcga
301 agctatttac tcgcggtatt gcgtatatac gctgcgctcg cgagagactt ggttaaagaa
361 agctcgggta gttaaaccaa agcaagaacc ttacaaaata gttaaagctc ttcccaagta
421 tgacaagctt tcaggtatga gacttaaaga ctcggcattg gaactattcg gagaatggca
481 aacgatggat tacattcccc cagaggctaa agatggtaag gtacctcgaa atgaatatgg
541 aaatgtggat ttgtttaaaa aatgtatgct tcccaaaggc acagtgcata taaacctgga
601 agtgcgaaaa tacctggact gaaactgtcg ctccggtctc gatatttgca tctcaatatt
661 gtataatcaa gaatatcacg agtcaacggc gttgcttgca cttgtttcca gccagtaaaa
721 gtttggaaca ggataaaacg atcaattata aggtaaaaag tttccttgac atagattgaa
781 cttatacttc aaaatttata aaagatgaaa tttttcttct attttaaaca aaatttatac
841 gcatcaattg cgttcattac gatattttta gctgtaagac ataaatgttc tgagaattat
901 attaaactat tttccaattt accagagaat gcttttttta actgtatggt acattctcat
961 actatttatt aattttaaaa atgaaaaaga aaataaatta aacctgcata cagaaaaaaa
1021 aaaaaaaaaa a
//