LOCUS LJ627074 4695 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67943.graph_c0_seq8.
ACCESSION LJ627074
VERSION LJ627074.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 4695)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4695
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67943.graph_c0_seq8"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1731 a 916 c 913 g 1135 t
ORIGIN
1 ataattatta ctacataata aaaagacatt aaaaagacgt agcactaaaa acttttgatg
61 caaacttctt ataaatcctt gaatattaca tcgtgtcact tactcatgaa ttagagggac
121 ttgtactttc aatatttgag tatgataaag acacacaaag tttaaagtag cagtcaaata
181 aaaatgtaac aacgctatac ctcgagcagg caagagaaac caagaggaca cagacaatga
241 ataatctttt tttacataat tattgttaaa ctgacaaatt ggtttatctc cgcctatgcc
301 ggtcccaagc ccggatgcaa aaggaggagg gttggccgaa agatgatcca aatggccgga
361 aaacaccaac gccgaatatt aggcggcgat taaataatca acgtaggttc agttgatctt
421 gagaaactaa atccactcca aacaactacc gtggaaagac gagggaacct atcacgtgta
481 tatattccga gaaaacctct atgaacttat gaatccgaga gtattagata gtagtgcgtc
541 ggataatccg actaataatt ggcgtcatcc gatgcccagg ttgaatgatg aagaggtgtt
601 ttgccgcgtc ttcgtaagaa gaaatgcaac tggcaataac actaacaaca ccaaaaacaa
661 aaataatgct gacatgttct cgattcggaa aaagcattgc gtcggtactt ggaacgtccg
721 cggattgcta caatcagaga agctggacat ggtggaaaaa gaggtcaaga aacatggcgt
781 aataataatg ggcctcagtg aaacacacat gggcggacaa ggatgtaata caacaaaaca
841 aggaaacatc ctatattact ctggcaaccc aaataaaagc gcgaacggcg taggcattct
901 gctcccgcca catattgaca aatgcctttt acaatgcaaa ttggtttccg acagaatcat
961 caccgtgaag cttaatgcca gaccgaacat cctaaatgtt gtgcaagtgt atgcgcccac
1021 atcgacagcc aacgacaagg atatcgatgg attctataag cagcttgaga ccacgctaaa
1081 ttcaataccc aaccgcgaaa ttacgatgat tcttggtgat tggaatgcaa aaattggcag
1141 taccacacac aatgatcata taagatctat cgtcggtaaa ttcggactcg gaatcagaaa
1201 tgaccgtggt caaagactct tggaattttg catcgaaaaa gacctcagca taatgaatac
1261 ttggttccaa catcacccaa ggcgcttata cacatggaca tctccgaatg gtgaatatcg
1321 taatcaaatt gactacataa tcataaacag gcgttggaga tcatctgtaa caaacgtaaa
1381 aacattcccc gatgctaaat gtaggtcaga tcacaacatg ctggttgccg aactggttct
1441 tcgactaaaa agaccgaaaa aatgtcagtc atccgtacta aagagcctgg gtccatcgga
1501 acgaaccctc ttccacgagt ccttgaaaag agagttacag cacgaatcgc cagtgcccgg
1561 ggcaaacgcg tgctgggaac gcctaaaagc cctcacacaa aaggccttga acgacctttg
1621 caaagacaga gaaacgcatg gcagagacaa caaacgcaat gtatggatct ccgatgatac
1681 atggaaacta atcatgcgca ggaaaaatat aaaaaaaaaa gccttgcatg acgcaaaaat
1741 tagagaagaa tacattaatc tctgtaaaac tataaaaaag agctctcgtc aagacaaaaa
1801 taaattcata aggaacatat gcgtagaaat tgagaaccac tctgtaaaca atcaaatctc
1861 cgatctcttt acaaaagttc gcctactctc caaacaattc aaaccaaaat catgggtcat
1921 tgaggactca tccagaaatc ctgtacacga cttggacgcc atagcggaga gatggagcaa
1981 atattgcgag aagctatata gagacgtccc acgaatacct tacagtcaat tgctcaactg
2041 gaaggagatt gagcttgaac ccttaattat tcgttcggaa gtagaagcag ctctcaaaca
2101 gctcaagagt aaaaaagcgc cggactctga ttacgttact gcggaaacat tgaaagccat
2161 gaatgaaatc ggcattgact ggctacacaa gatctgtaat catatatggc aacacgacga
2221 ctggccaaaa gattggacca aatcaattat tatcccattg cacaaaaaag gttcaaccag
2281 gaaatgcacc ttgaccctaa tatcacacgg cagcaaaata ttgttccaca tcataaacaa
2341 tcggatccgc cactacctgg actggcagat ccaacaagaa caggcgggtt tcgtaaagga
2401 aaggggcact agtgagcaaa ttctaaatat tcgacaactc attgagaaat cttacgaatt
2461 caacaaccca tttgtgatgt gcttcattga ctacaacaaa gtctttgatt gtgtcaactg
2521 gaaccatctg tgggaaatct taacaaagtt agaggttccc aaacatctga tagcgctact
2581 ccaatccctt tattacaata gccaaggagt cgtaagagta aacaaaaccc tctcacaatc
2641 cttcaagttt gaaaaaggag tgcgacatga ctgtatactg tcgcccatct tatttaatat
2701 ctatggggaa tacataatgc gacgtacctg caaggaaatg ttacaacaac acgaaggaag
2761 gacatcttgg aaaggaggta tcactattga cagcataaga atcaccaacc tgcgctatgt
2821 tgataatacc actctgtttg cgtcaaatga aacagagatg gtcgcttttc tggacaagat
2881 ggaagaaatc agcaaagaac ttagactcaa tataaataga aacaaaacta acgtaatgtt
2941 ggttgatcga aagaaaaaca taacatttac ggacaaatta aaacccaaac tggtcgacaa
3001 ctttaaatac ctaggatcat acattagcaa caacgtctca tgtaattacg atgtgcgggt
3061 aaggatcgaa atagccaaaa gcgcaatgtc acaactccac agaatttggg cagacacagg
3121 cgtaggctta aagaccaagc gtacgctggt gaccacgctg gttttctcaa tattcctaca
3181 tggatctgag acttggacgc taaagcagac cgacttcagg aacatagaca cctttgagat
3241 gtggtgttgg agaaggatgc tgtgttggac agctgaccga accaaccttt cggttcagga
3301 gaagttaaac atccccacca atgctacact ctcagccaaa tgcatctgta ggatcctgaa
3361 gtatttcgga catatcgcca ggaaaaagga taatagccta gagaaactat gtgtgacagg
3421 caaagtaaag gaaaagacag gagaagacag gataagacct aagggctaca gtccaccacg
3481 gtggaccgat cagatcagcc acgctctcaa aatcgagata aacgacgcac tccaagctgc
3541 cacggatcgg tgtgcctggc gcagtatcgt tgaaaaaagg atagacaaat agaggtcccg
3601 agcattggag aacacgacgc gaggaggagg aaactgactt tagaaaagtt aactataaaa
3661 gaaaggaggg aattgtagaa tacccaggat tggaagagtt actttcgatc atggcgcaga
3721 gttgtgccga agatctgggt tcaaatctca ctgatccaaa atattgattt tattcgatcg
3781 ctacttttcg gaaggcaatg gcaagccacc gagtatacca cctgccaaga gaaccccttc
3841 tgtgtaaatt gtaaaaagca cacagaaagc gcaaaaattg aggggtcact acgctctgat
3901 aagagttaag gacttatgat gatgatgata atgagaatgt gagttacgta cattaaggtt
3961 gtgtttggaa acatcactca aataatgctg tcatatatca ttttattttt attgtttacc
4021 gattgttaaa taaagataaa atgatacatg acgccattcg ggtaatactt gcaaatacaa
4081 cctaaattga caaattagtt tgaaaaatgt aaagtaactg aaaaagtaac tattaatgta
4141 gttactagtt acacaagtaa ttgattgtga gtaaagttat agttacagat agaaaaaagt
4201 aagaaagtta aattacagtt acaaaaaagt aactctaact gtaactttgt tacaaataag
4261 ttactttcca tctctgggaa taccattttg ttttttgata ataacttaat aaatattaac
4321 acaatacaat tttaattaat accagtttat tacccataga gttctatcaa tcatcctata
4381 agtagaagtt catcgagtag aacaaacata atttacaatt actgaagagg aaaaaaagaa
4441 tgcgtttatg gaatagcaca ggaatcatgg aatactaata actacttact gttatgaaaa
4501 gcacttttat aaaaaaaaaa aacacaattt aatattcttt cgtaaatttt ataaaaatat
4561 atgccacaaa acaaggattt acgaacaatt cataaaatat gttttactaa agaaattttt
4621 tcttaaatag tttttcggct taaatatttt taaaaataaa gcataaaatt ttttgaaata
4681 aaaaaaaaaa aaaaa
//