LOCUS LJ626698 1537 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c66902.graph_c2_seq8.
ACCESSION LJ626698
VERSION LJ626698.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1537)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1537
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c66902.graph_c2_seq8"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 522 a 282 c 301 g 432 t
ORIGIN
1 ggtaatgcga gtaacgatat ttagtacata atcttaattt gcggctgcca aaatgccgtt
61 caagttccac ttgaagaaga gcaggcagta caacgtcgtg tccaagaatc aatacgtgat
121 ctgtgttgaa ttgttggacg ccacttctat agaatgcact ctcagcatcg acagcgtcgg
181 tcaggagtgc ctggacaacg tgacgcaacg tttgggactg ggacaacctg agttttttag
241 tttgcgctac atttgccgtg gtacatcatc gcttcgatgg atagacatgg acaaacctct
301 aaagaggcag cttgaaaaag atgctaagag ctttacgctt tacttaagag ttatgtatta
361 cattgtggac gtgcagctca ttcaagatga aatgacaaga tatcattatt atcttcaatt
421 gaagaatgat gtgctagaaa acaaaataca atgtaattac agacaggctt gcatattagc
481 aagctattct atgcaagctg agtttggaaa ttatagcttg gagagacaca caatcgagta
541 tcttcaacaa tgcactttct tcccaaatgt aaaatgtcac tttttacagc tagattcttt
601 taatcacaaa tgtcatgtaa atctaaaatt ggtatttttt tattaaggag ctaagcaaaa
661 tggatccagg tgggcaagag tctctcttac acacagcaat atgccagtac aagagtcttg
721 gcaatatgac acaaactact gcagaagaac tatatatctc gattgccata cagttggagg
781 gttatggtac cgaaacattt actgccaagg ataacagtaa caataaagtt gtacttggaa
841 tttccatcaa tggaattatg gtagcctatc ctaatatgca aacaacacaa ttttacagat
901 ggaaagacat cagtaatgtc ataaatcata agaaaacgtt tagaatagaa tgccaattgg
961 agggtgaaga agcgaaacaa tttgtattca ctgaatcacg taacgcgaaa tatatatgga
1021 gattatgtat agctcaacac acattttaca tgcaatatca agaacatcgt cctttagaaa
1081 gatccaatgg ctactttgat aatgatacaa acgattcaag tgagcaaaca gtatccgtga
1141 atttggataa ccgggccgcg gacagtcata tgcggtggac aagttacaac gatctctcaa
1201 taccgtcacc gtgtcccgtc gtgtctgttt catcgactga tataaatagt ttgcgtgcgt
1261 tattaccatc atatagacct gcgcccgatt acgaaacagc agtccaaatg aaatataata
1321 acggtggaaa ccctccacag ccttattatg cgaatcaatc tgcaatagtt ggttcagata
1381 tctcgtgcct gttgggtgta aaccgtaata gatattaaat taatgaaata taaataataa
1441 gtttactcaa tatcaaaagt actactgata tttgtgatgt gaagaatttg aaccaacatg
1501 aaagaaaaca agattattct gaatcaccct gtatatc
//