LOCUS LJ624414 3371 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c66675.graph_c2_seq7.
ACCESSION LJ624414
VERSION LJ624414.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3371)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3371
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c66675.graph_c2_seq7"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1037 a 611 c 575 g 1148 t
ORIGIN
1 gagacaaaag ctgcctggct ggctgaccag actggctagc agattgcgag gtatcgaccg
61 gagttacatc cggacgctcg aagagaggga taacagaaga ggggatgagt taattatatg
121 agaaataatt tgcaaaccaa tcctgagttg cacagtcagt ggaactacta aagtgtatac
181 gatcataata aattcataca gcggcgttcg tctcggatta cttaagactc aggcagaatc
241 tttgagtgta aataaagaaa aacggagagt ttctcatcgc aatgattgtc agggctttgc
301 gtagtgttct tgcaggaaga caaattaatt tgcaatcaca gtcacagcta ctgaagtata
361 atcagtattc gggtatcgga caattgacac gtatgttgtc ctcccatcat gtctcgaaga
421 atattgagtt ccttacacaa gacaatcacg ttacatcacc taaaaatgtt gtacagaata
481 taaatgtggc aaacaatcgt cccttattag ttattcttac ttggctatta tcaaagcgac
541 aacatgttat gaagtttgtt aatttatata tggagcaaga ttttgatgtg gcagtagttt
601 cccttacgcc ttggcaactt ttgtggccta caaaaggctc tagactagtg gcagcagatt
661 tgttagcttt cttgaagcaa aacgaaagtt acgaacaaat tctgttacac ggattttcag
721 tgggtggcta catgtggggt gaagctttgg atttgataga aagtaacaag gacaaataca
781 gtaatattac agacagaatt gttggacaag tgtgggacag tatagctgac gttatgcaaa
841 ttccgatagg ctttccccgc gcggtatttc cgaaaaatat aatgctgcaa tccatgttgc
901 ggaagtattt ggaatatcat atgaagacat tccatctgca agcaacgcaa tattatattc
961 gatccagtca agtatttcat tcctccagca tacgtgtacc agcgttatta tttataagta
1021 aaaccgatcc tgttggaact gtacccagca acttgagttt acgcgatact tgggagtcta
1081 caggaataaa gacttacgtg aagatattcg aagagtcgcc gcacgttgct cacttctaca
1141 agtatccaaa ggaatacgtt gccgaactct atgccttttt acaaaaacta aacttgatac
1201 aaaatgaagc aaaaattaga tcgcgccttt aattatttta aaggcactta tttggatagg
1261 gattagttgt gttttttata taaagttgtc ttttcgatga tattacacat ggaacatttg
1321 tagtatccag tatacacttt gacacacacg tacatgcgta tagcacatat agtaaataat
1381 tttatatatt ttatacaaaa tatttgtatg aaattatata atttaagtaa tcaaaaggtt
1441 tttggtacac aaaaaagagg tctttaaaaa tgtttaaaaa aaatttatct taataatatt
1501 tctatgagtt taaaactgcc tctcttaaag aattatgcat ataatgaaac atgtgttatt
1561 acttataatt atttaaatag aaattataat attctaaatg caaattttat ataaataaat
1621 atatattacg atttttatat cttttatctt tctttgtaaa taaagcaaga tatattaaat
1681 attagatata ttaaagaaaa caagtctgta ctgcagtcta tactgtagtc taacaccata
1741 tttatcattg tatcatacat tatataaata ggcataattg tataatatat attttgtatc
1801 aatttcatta tatatattat atgttataca cgttaatttt atttcatgtc gaaattgttt
1861 gttctaattt tttttccttt tttctttttt tatgtttctt tctcttttgt tcctctaaaa
1921 gctcttctat ctcatccgga tctttacctt ctaagattaa tttttttcgt ttattgatca
1981 ttttcttttc ataaaagtca gtctcatcta acctaatctc cgcttctcgt ttcgccactg
2041 atatttgcgt caagatcgta actatttcct tatcgtccac cttgtattcc gttaatttag
2101 tgcctatggt atcttcaatc ttgtgtaaca atttgatatc gtttggagtt atcaagctaa
2161 ttgccatacc tcctctacct gcgcgagctg ttctaccgac tctatgaata tactcctttg
2221 gtacatttgg tattacgtga ttaactacta attgtactgc aggaatatcc aggcctctgg
2281 ctgcaacgtt ggtagcgatt aatatctgta tatgatttga cttgaactta ttcagcgcta
2341 ctaaacgttc cttttgcttt agcattgcat gaagagccac gttcgtaaat ccaacatcat
2401 tcaatgtcat cgataataat tgacagtttt tgcaagtgtc cgtgaatatc atgatacagc
2461 catttttatt agtggtgcga aatgttctaa tcacttctac taaatacgaa tcaagtacat
2521 ctttaggaca caacacataa cgttgatcta gttcctttac agtggcaata ccagcgtcat
2581 ctttctcttg ccatgtgaaa accttattgc aagccatttt ctttacttta tcaagagtgt
2641 ctgtcatcgt ggcgctgaag aacaatattt gtttttgctt aggtaataca gcaaatattt
2701 tcttcagctg tttgtcaaaa tggccaccaa gaagcctatc agcttcgtcc aacactaaaa
2761 atttgatctt ttgcaaggaa aatgtattgc agctgtctaa atgatctgcc agtcgacctg
2821 gtgtagctac aactatatgc ggccgttttg acaattctaa tccttgtatc atcatatcca
2881 tgccaccaac aattacacat tttttcaaat taataacctt accaatagca gcaaattgat
2941 ctgcaatctg aaaagctagt tccctcgttg gtgtcaatac aagagcaaat ataccgtacg
3001 gatcctcgca taatttttgc aaaatgggca gggcaaacgc cagagtctta ccactgcctg
3061 ttttggcaca gcctatgcaa tcttcaccca tcagtattcg aggaatgcaa ttctcctgaa
3121 ttggagtcgg tttttttaat cccatagatt tgcattgcgc gagaagccaa gaattcaatt
3181 tcaaatgtaa gaaatcttta acttcttcgt tcatgttaga atgatgctat aaacagcaaa
3241 cagctaactg cagctactat gcaaaacagt tataagcagt tacaagcatg gtggaaggat
3301 aacatggtgt gtgcagttcg cgcgtgtctc tctctaaaaa tttgccctct tttttttttt
3361 tttttttttt t
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