LOCUS LJ622589 699 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c66649.graph_c1_seq2.
ACCESSION LJ622589
VERSION LJ622589.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 699)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..699
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c66649.graph_c1_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 247 a 119 c 102 g 231 t
ORIGIN
1 tatattaaaa aatattctca gaaacgaaaa tttctcaaaa attattcatc taaaaattat
61 gcatcctctt ttgttctttc cctcgaagaa tcgtcattta tatttattct gctttaccta
121 tactaatcaa tattttatat atattgtaaa agtattcaac tcgtttatcg ttttcacaag
181 tatttattcg ttcttgttac aagagcttcg tatctccatc acacaagtac cacgagtgag
241 tcttcgcgtc taatgcccca gggggcgaat gcatctaact caagcaacca atcagcgagt
301 tcggggcttg aggctagtgc gttaattctc tacggtgcgc catcatgtta tggcgggtaa
361 tttgaatgga gttaatctgc gcaagacgct ctttcaatat aaactaacaa agttaaaaat
421 ccacttaata ataaatattt ttactcaagt tcataaaacc gactaaatta catgccgaat
481 ataaaatgat gatagcatca ttatagtaaa ataaaaaaag tttgaaaatg taataaaagt
541 ataaatcaat tttttttatg tttgtaataa tagtgtaaga ttgatgatta aaaatttaga
601 cgattaaaaa cggtattgta atcttgaaca tacttataca tatatactcg gttcaagagc
661 acattctgca ggaacatacc cagcgcgaac gaaaattca
//