LOCUS LJ622588 530 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c66649.graph_c1_seq1.
ACCESSION LJ622588
VERSION LJ622588.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 530)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..530
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c66649.graph_c1_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 148 a 108 c 94 g 180 t
ORIGIN
1 tatattaaaa aatattctca gaaacgaaaa tttctcaaaa attattcatc taaaaattat
61 gcatcctctt ttgttctttc cctcgaagaa tcgtcattta tatttattct gctttaccta
121 tactaatcaa tattttatat atattgtaaa agtattcaac tcgtttatcg ttttcacaag
181 tatttattcg ttcttgttac aagagcttcg tatctccatc acacaagtac cacgagtgag
241 tcttcgcgtc taatgcccca gggggcgaat gcatctaact caagcaacca atcagcgagt
301 tcggggcttg aggctagtgc gttaattctc tacggtgcgc catcatgtta tggcgggtaa
361 tttgaatgga gttaatctgc gcaagacgct ctttcagcct cggccagcct gaaaggacac
421 tcgtcctcga gtgttattaa ttttcctgta taggcagggc tgatgttgct tatggtagat
481 gattgacatc tatacttaat attaaacgca gaacttagct tatgcttaac
//