LOCUS LJ621834 2013 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c66547.graph_c0_seq3.
ACCESSION LJ621834
VERSION LJ621834.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2013)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2013
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c66547.graph_c0_seq3"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 685 a 339 c 406 g 583 t
ORIGIN
1 acgcagagta catgggggag tctcttttat accgatacca gtgaagtgcc agagatggta
61 aagtgtctaa tagaaaatgt tacattttcg caataggtga tcgtatatcc tgcaagcaag
121 gaatcgatca atatgccgaa gaaattcgtg ggtgagaata gtaaggcggt tgccgcccga
181 gctagaaaag cggcagctaa agaagccgaa actgtaaaaa aagcgatgga agctgaagat
241 aaggcctggg aagataatga taaacagatg ttgaagaaaa aacaaaaaca agaagaactg
301 gagaagaaac gtcaacagca attagaaaaa aaggcggaag ctaaagctct gcttgaaaag
361 gaaatggcaa atataaaaat cggtggtaaa cagccagcgt ccaaagttac tagagctgaa
421 attgtttctg ttactgagaa gcgaaatcaa gtggctatga agaagaagga ggacgagaaa
481 ccgatcgagg aaaatttaaa cagattgatt ttggaaggtg aaacggctca cggtatagat
541 gaagctatat ctgttttaag ttcaaaggat ccagaattag atcgacaccc ggagaaacga
601 atgaaagccg cgtacgcgag cttcgaggaa cgaacgatgc cgatgattaa agaacaaaat
661 cctactttga gattgagtca gttgaaacaa atacttagga aagaatggat gaagtcggct
721 gagaatccgc ttaatcaaac gttgaatcgt tgacgactgt atgatgatat caaacgaacg
781 cgacacacac ttgcgcatca tggactgatt aattatttaa ttttgttaaa ataaataaca
841 accaacttgc attacgatgt aatcatctgt atacaatttt atttgtaaaa catataactt
901 atattaaaaa gtatatgaaa aataacggta tataaatctt tggcaaaatg tatgtgctgt
961 tccatagcct ctgtcagtat tcactggatc acttagaata actctttcat ctgacacgaa
1021 agagcgaaat aatagtatac aattcattta cgattgtgtt aataagaatt tttaggtata
1081 ttaaaaattt acatttaaaa tagaatcgat tttatacttg acaatacata tcaagtatta
1141 aattttgaaa tatgtcaaag ttatttcaag tgatctaaca aatgagacgt cttgtattta
1201 tatttatcta tacatttttt tctgtatata tctgtacaaa acttggcaca tttttacgag
1261 gccacctgaa cttgattgat ttatctctta tcatttaatt tgactttagt ggagtcttct
1321 tgaattataa agttcttttt ttccgttaaa tattatatct gactgataat taaattaatt
1381 gctaagcagt ttgttaagcg cttgaatcga tgcaattttg atataataca gcactttaga
1441 cattatttct agagtcagga tgttattact gccatttttt gttcttccac aaatctataa
1501 aacaatgtat catgtgattc aattgttggg gacattcagt catcggacta tgaccagcca
1561 ttggaatagc ttcgagaaaa gctttcacca ttgtcctctc catttgacac tcttgtacta
1621 gcgatacttt attatctttt aatccatgca ctagaagcgt tggtgtgcat atttttctgt
1681 gaaaagcgta atcaccctgt ggccagttca tgccgttcaa tacgtatttc atgtgcgaag
1741 gccactgttc cattgattct tgaccgcaat aaggatgctg tcggcctcgt gcagaataga
1801 gaacatctcg atgaagaccg cacatcagta gaggcgcaag aatcgccctg agacagcaat
1861 gacccgcgca ttccgtgctc ggtggagcaa gaggggtcgg accaccgccc gatattaaca
1921 caagctgatg gatattgcta tcgtatttac aagctaacgc tgtagcaaag ctgcacctga
1981 aatttgcgga tagcaatttt attagtatta cta
//