LOCUS LJ621170 1859 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c66336.graph_c4_seq1.
ACCESSION LJ621170
VERSION LJ621170.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1859)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1859
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c66336.graph_c4_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 619 a 301 c 350 g 589 t
ORIGIN
1 gacagttaaa ttgaaagaac gaaaataatt gtatcgctgt tgcgaccgct cgcaccgtcc
61 gcgcaccgcc cttgggttcc ccctgttttt ttttgcctcg tatcgttttg cgcgacggcg
121 ttcgctcgta gtcgcgtgcc gcgacagacg gacacgagaa cgacgttacg ggagccaatc
181 ggcggctccc tgtgtgtggc ctcctgtctc tttgtatata agccgtatac acatcgcgca
241 gtagtacggt accgacaacc ctagggagac ccgacgtcgg cttgttgaaa ggtgcttgtt
301 gcttcctgcg atcgagatgg gcactcggga cgacgagtat gattatttat ttaaagttgt
361 tctcattgga gattctggag taggaaaaag taatctctta tcccgattta caagaaatga
421 attcaatttg gaatcgaagt ctaccatcgg agttgagttt gcaacacgca gtatacaagt
481 tgatggtaaa accattaaag cccaaatctg ggatacagct ggacaagagc gttatcgtgc
541 gattacctct gcatattacc gcggagcagt tggtgcacta ctcgtgtatg atattgcgaa
601 acacctgacg tatgaaaatg tagaaagatg gttacgagaa ttacgggacc acgctgatca
661 gaatattgtg atcatgttag tgggaaataa gtcagattta aggcatctgc gtgctgttcc
721 aactgacgag gctaaggcgt ttgctgagag gaatggctta tctttcattg aaacatcagc
781 tttagattct actaatgttg agacagcgtt tcaaaatata ttaacagaaa tatacagaat
841 cgtatcgcaa aaacagatac gagacccacc tgaaggtgat acaatccggc cacagaatgt
901 agaacaaatt gaagtcaaac caacgatgaa tgccgaggga atgcgtaagc agtgctgcca
961 gtgactcacc ttgttgctta aaatgtgtgt acacgtatat acagtatgaa tatcacggaa
1021 gtacagttgg ggatatctaa tttctaacga aaaaatgatt tcgtttatga tgcagtaaaa
1081 agtttctgga atgattattt gtataatagg atagatttaa ttataaggaa acactgtggt
1141 tagtttatta ttaatgttaa cttgattgta aattgagtta attttaacat atatcaaaat
1201 taaatattat taaagacact tctatcacat ttctttcatt ccaataattt atattctata
1261 tactgttgaa accatattga actatagagt cgtttatatg tatcatgtac atataattat
1321 gatctcttat acatatttaa ttttctatta aaacgattca aatatttaag tttgtttcct
1381 ttagaagatt gtgttgcaaa ttatgtaatt tacagaatgt ttcaactaga tgttctttta
1441 attatatatt catatttttt cgggacatca tgtcaacatt tttcaagtaa ctaacgattg
1501 aaaataagaa acattttgca aattaaatct cagaagcaaa taaataacaa aacaatactc
1561 tttaactcat attgtttttt aattattaat ttttttaatt attgtttttt ttaaatttta
1621 atatgaaaca tatataaaaa aatgaaacat tacagtaaat aaatttctct ccattttctt
1681 atgaaggaaa cattgacttc gaattgacta aagaatctgt aattaaaagg acatttggtg
1741 atagattttg gatgttctat acaataagat taaatgcttt ataacaggca gaagtaggcg
1801 ataaaaaagc gatatgttca acaataaata tatatcactg aaaaaaaaaa aaaaaaaaa
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