LOCUS LJ620558 1405 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c66329.graph_c1_seq20.
ACCESSION LJ620558
VERSION LJ620558.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1405)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1405
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c66329.graph_c1_seq20"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 404 a 252 c 240 g 509 t
ORIGIN
1 tatatacata catatatata cagaatatcg catgtcaaac tttctctttt tccttttgtt
61 gcagattttt aaatacattt ggaaatacat aggtaaaaac agaattatag ttgaagagaa
121 gactgattag agatatcaag ctttgaatac aaagcgatcc ttgagaacct ttggaaagta
181 gcgagaatca ctatctttac acaaaataca tcaatgagcg atgtttaatt gaaatattat
241 ctaaatctgc ctgtgctttg gacaaaacgg cacgtgatgt ctcttctgag gtaattttga
301 tcttatgatt ttctattagg gcttttccac gatatgctgc caaatgagcg tagtaagttg
361 gcgctggata gcttaccgct ctcgtacagc gcacatacat atgacaaaga taatacgtca
421 tatcttcaat ttcatctttg ctcaaattag aatcgttacg tatgcatcta tatttggtag
481 gccttgcagt accctgaatg ctcgcgtgtg agacgagata aaactcgata tcctctggat
541 gagtaatttc agtatcgaca attgtacccg ctttcacatt accgtttttg tcactgtttt
601 tgtacccttc tccttctctt tctcccggga aaaaacgcac gtgatgtctc ttctggacaa
661 ctaagcaggt aatttgaata ttgctagaaa atttcgcaca cgctctttta atagctgtta
721 tttcaatctc cttaactttt tttagttgtc cttcgctaac tccatctcga taatatatga
781 gtctcattgg tacttttttt gtcttaattt tataagtttc cagttgcgac gttattatgt
841 cttcgagatc tgagatcatt tcttctctgg gttcttgaag tttatacata acattatact
901 ggaagccgaa agtatcaata cttgcagtaa ctgctgctat ggagggtgta tcagcatcag
961 gagatgggtg agttacatcg gcaccaacaa gcataaaatt gttctccaaa cattttggtg
1021 gtttatgaag tgtatagtta ataccattta gttttgcatt tatttttaga agaatatttg
1081 ttattattga cctggttgcg aactgactgc ctgaattcgc tctaataaaa ttctgacatt
1141 ttatacactg tgtcagaaca cctaatttca attcggccat ctgttttatc tcgctgtata
1201 tgtctgctgt aaaatcttgt gactttagac aatttggtat gatcactatt atcaatttca
1261 atgacttatt tttcgcaaag taggattgga tgtcattctt atttttaaaa tttttgaatt
1321 ggtcagtttt ggcatctttt atctccatac caagatctct ggctaaggaa aaaaaccgat
1381 ttgacaatat aaacataatc tatat
//