LOCUS LJ617022 1487 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c66147.graph_c0_seq3.
ACCESSION LJ617022
VERSION LJ617022.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1487)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1487
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c66147.graph_c0_seq3"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 535 a 229 c 301 g 422 t
ORIGIN
1 tttcaaagta gcacagcgta gtgtttggta cacctataca cgtctaggtt agaatagcta
61 ttttcataat taaaaatatt tacgctaatg cggcaatgtc atgtgatttt tatgagatat
121 tcgaacgtta tatattgact gacagtggaa tgtaattctt tatcggacgt agttattcat
181 tgccgtgagg aagggcttta ctatggagtg acgattgttg aagagcgttg tttatagcct
241 ccttgtcgaa acggtcccga tcaaggttaa atcgatagta attgcttatt tttaagcgcc
301 gtgcgagtca gtcagaaaaa aatgacctcg aatgaagcag gcgtatcgct cgtcgccagg
361 gaggacatca actggcggaa agatttaatt tcgcaattac gcgaaagaaa cagatcgcaa
421 accaattgtt ttgcggatct catcagtctg cataatagat tatttgaaag tgcaaacaca
481 ctgcgaaata caaatatgca attgacaatt gcaaatgaga ctctccgtcg ggaagcagcc
541 aatggcagca ttggcatggg tggaaatcct gatcttgaag ctagactctt aaagcaagcg
601 gaagaattgg cgatgctgca taagaggaaa ggagaacata cacaacaaat agtagatctc
661 aataataaat tgcaggaaat gacaaaagaa tttcaagcaa aggaaactag ccttgcagaa
721 agtttagaag ccaatactaa cttacgttta gaaataacta aatgccttgg tagagagaaa
781 gagttagaag gtattaatca gatgctcaag gatgaacacc aagccttgca acttgctttt
841 gcatctttag aagaaaagct taggaaaaca caggaagaaa atcgacagct gattgaacgt
901 ttgataaaat ataaagccag agatgcagaa aagatgaatg aagaaaatga taacttttta
961 aggaaaagac aagcaaagat gcaaaaggaa ttggaagatg cagctcgaga tacgcgacct
1021 gttagtcccg atcgtttaag cttaaaagaa gtcgctggtc ttccgacagc agtgccaacc
1081 aaagtatccg taacatttcc aattacaccg taaagagtgg tgtagtttac aatgctgtgg
1141 ttgtaacgtt tttgttacat gaaagactgt gtattatata tgctttgcaa tgtatattcg
1201 atatatacaa caacttgtcc ttttagctaa tatttattta atgttatatt tagttaaatt
1261 agaaaataac ttctctttct ctttaacaaa agaatgatac tttcgtgtag aattaaaaaa
1321 caaacgtttc tactaaagct tagatctgac gattaaaaaa tgatctatta ttatttagtt
1381 atcactgagg ctgattcaga ttgaaatagg gttacttgat catttgtaca gttatattaa
1441 ctttataaca ataaaggatg aagtaatata ttaaaaaaaa aaaaaaa
//