LOCUS LJ611990 1536 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c64746.graph_c0_seq2.
ACCESSION LJ611990
VERSION LJ611990.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1536)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1536
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c64746.graph_c0_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 436 a 304 c 312 g 484 t
ORIGIN
1 tttttttttt ttttaaagaa aaatgcttta ttggagattc ttcttctttt ctcatggtat
61 atattatgtt acatctgaca cgtaaatgta atggcagttt taattagcat gagtagataa
121 cagtaacgta tgtactcgac ggaggagaga aatgtgtgtg tttgctcgag agataagcaa
181 acgaggagac gaacatctaa tgagaaagcg cttgtactgt gcacatggag gccattaact
241 attatcgtta atcattagta cgcgatcgaa ataatttgta ccaattctta atcgtatttt
301 tcattttact gcaatgcaaa attgttcaga atacacatat tatatttata ataataaagt
361 aaaaaaaaat tgtaattata attaaaatga ttaataacat acgctataac tctcggactt
421 ttacaaggct cgtataaagc aattagatgg gataataaat aagtctccga caataagtta
481 atagatttaa ttttgtaacc gcgatattaa ataaatattt atcatttttt cataatttta
541 taacaagcga taattctacg tataaagaat tttgctcgat taattcggtt acttcgcttc
601 aagattattc taaattattt tataaaggaa acaacgtcga cttaatgaat attccataac
661 tttcttcttc tccctcatcc tcgctccctt cttttctatt tctatctaca tttgctttta
721 atcttatttt tatctttaat tctactagtt ttattctccc cgatttttcc aatagtcgcc
781 cctcaaacga gagctttgct cagacacgtc aataacatca tcgtcgcgat ttctgtcttt
841 acagaaccgg cagagtttcc gtagattctg ggcatcgtgt gatctttgtg atcaatgtga
901 ttcatgtgat cgtggtgatc gtggtctcta tgatcatagg gatcgtacat cctcgtcgtc
961 gtggaataag ttgaaaatga cgtcgacccg caaaccgtgc ccatgatgag ttcctcggtc
1021 gagcccatga gtatcctgaa gttataatca tgtaggtcca attgcgaata catgaagatg
1081 ggcagtctgt cggagaggac ccacaggttg ccgttccgat caaccttaag atcattgggg
1141 aagatcatgg tgacgttatc ctgatagaca tagccctgtt gttgcatagt gaatttattc
1201 tgcggcctcc aacaggcgat ggcgttcaga ttcgtaagcg cgtaaaagag aattccggtc
1261 ttcggatcca ggaagctgac gctgctctgg ccattgggcc cgcgcgatcc cagcgtttgg
1321 aactcgtggg atgtttctgc ggaactggcg cgcagagggt cacgcaacaa cctcgtactg
1381 acggaaaatt ccatgccgct ggagagtgga tggtagtaca aggtgctgta gccatcacca
1441 gtcggcgcga gagccatccc gaacaggccg tcattccatt ggaacgatat tccggacacc
1501 ttgaattctc cacccatcgg atccgggtgg aaagag
//