LOCUS LJ611500 1127 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c64468.graph_c2_seq1.
ACCESSION LJ611500
VERSION LJ611500.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1127)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1127
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c64468.graph_c2_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 399 a 181 c 148 g 399 t
ORIGIN
1 atattcgata tatattaata atttactctt aaatttatct agatctaact ttacacaaat
61 ttaatctaaa gattatcagt tattactctt tttgatttaa tttgaaagag attctgattg
121 atcctctatt gatcgtttat tttattatta attactttaa gatattccat tatacactga
181 ctctttgtgt gtatgggctt atttttttat aacattttta ttaattcaag ccagaagcaa
241 ccgcggcaag cggagcggtg aggagggaga agcagcaatg gttgttttac cggcctcacc
301 gcgccgcctg ccgcggctgc ctctggcttg gcgaccaacg ggcggtcccc gtatgcagtg
361 acctctcata agttggcagg aaatcagcag aatcgaatgc gacttatcag aaaatttagt
421 acttatttgt actactttgt acaaaaaaaa aatttttttt atcccgtgcc atttataaaa
481 aaatcgtgcg ctgctaactt catattaagc tagcagagaa gaaaacccaa aagaaaaaaa
541 tatatataaa taaaaaatac gacgtatata gttagcgctg aaatggtact aaattgtacc
601 acccaaaaaa aatcaaaata tttttattaa ccccttaaaa caacgcctat tttgtaatag
661 gacatttctc ttttgatttt tttcaaaatt taattaatca aattgaacta aatttatctt
721 tttgtttact accaattatg tgtactattt tgtaccacca gaggggattt tgtaccccgt
781 gttatttaaa aaaaattatc ctgccaacat aaaataaaca taactaaata aatcagaatt
841 attaaaaaat gataaataac gatagattct attagtacaa aatttgtact aatttgtatc
901 acccaaaaaa cttgaaaata tttctattaa ctccttaaaa caacctctac tttgtaatag
961 gatatttttc ttttgatttt ttaaataatt taattaatta aattgaaata aatttatctt
1021 tttatttact accgattatg tactattttg taccaccaaa ggggattttg tactctgtta
1081 tttaaaaaaa atgtggttct gccaacataa aataaacata actaaat
//