LOCUS LJ611166 1660 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c64977.graph_c1_seq9.
ACCESSION LJ611166
VERSION LJ611166.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1660)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1660
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c64977.graph_c1_seq9"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 639 a 264 c 368 g 389 t
ORIGIN
1 tcagctatca aaacgtgaag acgaaagaga ggggttttgt cgagacgaat cctcacgtta
61 atgtgttggg tgtgggatac gatcgtacac ttggcggact agaaatgcaa attagattac
121 agaattattt ggcaacagaa tttgacgcgt taaaaaagac accaaattcg gtgtttacga
181 gtccgagagc gatggcaaaa ctcttcaaag aagccggacg cgtcaaaact gtactcagcg
241 ccaatgcaga tcattttgcc cagatagaag gcttaataga tgacattgac tttagattgc
301 aagtcacgag ggaaaaactg gaggagatat gcgccgattt atttgaacgt ataacaaatc
361 ctgtgaagat tgctttggaa acttcagctt tgacaatgga tgttatatcg catgttgtac
421 tggtaggagc aggtactcgt atgccaaaag tacaagagac attgtcccaa tatgtaatga
481 cagaattgtc aaagaatgta aatacagatg aagcagctgc tttaggagct gcgtacaaag
541 cagctgatct cagtcagggt tttaaagtca agaaatttgt cacgagagat gctatattgt
601 tcccaattca aatcattttt gatagaaata tcgataataa agttagacaa gtgagaaaga
661 tgttgtttgg caaaatgaat ccttttccac aaaagaagat tattacattt aataagaaca
721 tgaatgattt tgattttcat gtgaattatg ctgaattaga ttatttgcct cctacagaga
781 taaagtctat tggagattta aatttatcca caatactgtt gagtggtgta tctgaagctt
841 tagaaaagca tgccaaggaa ggtgctgaga gtaaaggaat taaagtgcat tttaatatag
901 atgatagtgg catattgaat ttattgaatg tagaattagt gtcggaaaag tcaagcactg
961 ttgttgacga agaagagggt actttctcaa tacttggctc aactattagt aaattttttg
1021 caggttctca tgagcaagaa ccaacggaaa aaacggagga agcaccgaaa gaggatataa
1081 aaccagtaca tgaagaacca gaatcttcag aaccatcgaa ggacacagag gagaaggaaa
1141 agaagaaaaa tgagacgaaa gtagacgaag ataaagctcc aaataagacc gagaaagcgg
1201 ataaagaaaa gaaatctacc attattcaaa tcaaagaacc tatcagttca aacgagatca
1261 aactaggttc acaaatcttg tccggcaaaa aactcgcgga atctcgagaa aaaatacatc
1321 atttggacgt gcatgacgaa gaagagggtt ctcatgagca agaaccaacg gaaaaaacgg
1381 aggaagcacc gaaagaggat ataaaaccag tacatgaaga accagaatct tcagaaccat
1441 cgaaggacac agaggagaag gaaaagaaga aaaatgagac gaaagtagac gaagataaag
1501 ctccaaataa gaccgagaaa gcggataaag aaaagaaatc taccattatt caaatcaaag
1561 aacctatcag ttcaaacgag atcaaactag gttcacaaat cttgtccggc aaaaaactcg
1621 cggaatctcg agaaaaaata catcatttgg acgtgcatga
//