LOCUS LJ610080 1517 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c64611.graph_c0_seq1.
ACCESSION LJ610080
VERSION LJ610080.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1517)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1517
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c64611.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 497 a 246 c 221 g 553 t
ORIGIN
1 aaggagaaga gacacttatt tctggagcaa gttctctcgc cggttcctaa actctggaac
61 aaacgcattt cctttcatcc gagcaccaaa aatttatagt aaatcaacta cttgtgtttc
121 atagctgaaa atcaaaattt gaaactcctt tatcgaatta catatttaca aggaattgga
181 ttcgttttaa cgtgaaacag ctcattttca tcgaaccaaa aatttatagc ggactccatt
241 tgttttttaa tactcgacaa tattatcttt cataggtgaa attaaatggc agctcagttc
301 tatcttgttc aagtattttt catttatgtt ttatttagga actctttaga agttttagga
361 attttctcgt ataggagatc caatgcaata aaaaattaat cttaatctat caaaaaattg
421 gatactcttt atcttacatt tttgctgtac gtattcagtt acaaatataa atcaggagag
481 taatttatac gatggaaagg gttaactatt tttttaatta catatttgat gtcattaaga
541 caatgcaacg ctttgtaaat taggaaaaac tttgacatac agaacatttt cgcttccaag
601 ctgaacacga gtgatcctgt aagcatgcga taaaaaacac gttggtacct tctcaacata
661 tcaaattctg tattatagat gttaattaat tgcaattcgc atagcttatc acaaatatca
721 ttgtataatt tatttttgga atctttatcc tcttcaaaat tcataattgt tataggagtg
781 attcaattaa tatactagtg gtttgaatca cttgctgtcc tctgttcata gctttctcat
841 tgttttgatt tttattgttt acgcaaaacg tcgaatccgt cctgttatcc gtttcttatc
901 gaatatgatt atagtttaga ggataggcca aggatggttt gacttttccg taccttctgc
961 cgtttcgcga ctggcatatt ccgatttcct tcttgtcaga gagaaaaaca ccatagtaca
1021 aatcccacaa tatatatatc gtcactcgtt aattaggcac acatcttaat ttttactcat
1081 gacactttaa gctgcgtcgc gtttatcttt ataaatgacg aagtaaacgc gatgtgagcg
1141 tgtgatacgc accgtcccat tgttacaaga taaaacggta acgacttaag tctaatattg
1201 cgcttttgca attaatgtat ataaaatgac ctattttaca tctcgtacac ctcgagatta
1261 tttttgtaca cattttatta tgtacaataa agtgactttg tataataaat tagattcgta
1321 ttattggcaa taatatcgcg attattatgt attatgaatt gaagaaattg tttttaaact
1381 cccttaaatc cattttctaa tttataaaaa tcagagttgc acaagttaat atgtttttga
1441 attaaactaa attaagttaa aggtaataac ttatacaaaa ttagttacat taaaatttgc
1501 atgaataaga actaaat
//