LOCUS LJ609000 1261 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c64957.graph_c1_seq1.
ACCESSION LJ609000
VERSION LJ609000.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1261)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1261
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c64957.graph_c1_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 416 a 224 c 175 g 446 t
ORIGIN
1 tatatctata tatatatata tatgaaaaaa ttatatattt atttgaaatt gactgtcgat
61 aatgatagaa aatggctaca agcactatgt tgcacaaatt aaatatgaaa gaaatttgaa
121 atgttttacg cgtgtcatca gaaagtcttt ttgttaaaca ttttctaaat taggaccatt
181 catccatcgc gatatcaaat gcaacttgga aatttttgca gtatcgatat ggcaatgttt
241 tttcgcttga acacttctca caatggtatt gtaattcgta aaaatgtcgc aattctattc
301 aggtctatga tttaaggaaa attcacgatt cacatgcgct ttatatttat atgaaattta
361 aatttcacac gccgtgggat ccaataattc atcccaatta atacttcttt gaaatacctc
421 ctgttgtaac cataattcat aatgttgctt aaactcctca gtcaattcca catttgcacc
481 gagtacggac gttactgatg cgtcaaccgg ttccatttct tcgtccctcg gaatattaga
541 atatcttcga ttattaaact gatcaacgca tgtacgtagc tcacactctt caacttggaa
601 atcccatggc cgcgcttcta agtctattta gtaatttaga aacgttataa attctctaca
661 aaatctcatt aatgtaaagt attaaatatt acaaatttat taccattgcc gtatgcccag
721 tcatcattta agcgatgtcg aactttcgca taaatgacac taatagtttt catatttgtc
781 tttctccact gccgtccgag atatttcgtt tgcatcttca ataattttaa aacatataat
841 tgcatcattg catgtctgac ttttagtgtg cgttttaaaa taggtgctga cttaaaaacg
901 actaacatca ttatcctact gtgtttccat ttggttaatt tgttcaaaat tcttaataaa
961 ttaatacaag agaaaacatt tctccatgaa aaagattgac tatggccgat ttcgagactt
1021 tcagtagtta attccggctg atcaccaatg acacacatag gaaagtccaa aataggaata
1081 ctgttgtaat ataaattcat taattacata ttatgacact tgaaattttt aatcactgtc
1141 acatttttac ttacatattc ttcgcctcaa tgtacgctat aatgttctga tttaaaaatt
1201 tcaatacaag aggtatgcaa ttggcaaata ctaaatgctg tgacataaat tcgaattggt
1261 a
//