LOCUS LJ608992 1925 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c64482.graph_c0_seq6.
ACCESSION LJ608992
VERSION LJ608992.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1925)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1925
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c64482.graph_c0_seq6"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 676 a 397 c 406 g 446 t
ORIGIN
1 ttaattcata attttctaat ctttcaggta tcggaaaaag acaatgaagc caaacagacc
61 tttgttaaac aagagtctat aaattttgga tacgatgctt cctcgtatgc caattattct
121 tcatcgtcgt cctccccttc cactatcgct caacctttac caggacaacc acccttgcca
181 cctatgccac cgccacccag cggagttcca cctccgcctc atgtatttgg accagtgcct
241 tcccaagtcg ctcccattca agcatgggca catccgcatg ctccatggca atggataaca
301 tcgcaaacct cccctttacc gccaccaact ccgcgtgaaa ttactaatac ttttcaaaga
361 gaaatgcctt taaggggtaa ctatgtacgt cgcgaacgat ttagtcacaa tagaagcaat
421 atgtatgttc agaggaataa ctttcaacgt aaaaatagaa ggttggcgcg attcggacag
481 tcgcagggtc aattcgatca ggccgcatac tttgcaggcg cgacactgac gggtagtctc
541 ggtttggcag aatggcagag aaataattat accgcgacag caaatgacgc tataataaat
601 cacatgaccg tacctctacc taatcatcct atacctccca ttccaccagg aatcgtgacc
661 agcaggcata gcgaagaaac agaggatcga gatgttaaaa ctaaggaagt tatagtaaag
721 aagaataaac caaggaaacc aatgtcccaa agttatccca gtagaccatg gaatagagag
781 gacgcggaga gagccttgaa gactgaaaac gaatataaca agaaaaataa gattaatgcg
841 cagagcttaa taattaaatt tcccgatcca gatctaaata aagacattgt tagattattt
901 catcctggta tacaaaacat acattttcaa agtccaagcg ggccgcgata ttgcttcatc
961 cagatggcag agaatgtgaa tatcgacgaa gctataaaag atttggagaa aattcagttt
1021 ggtgtaggga atctgaaagt cgagagaaag tcgttaagag acgaggataa tccgatgccc
1081 gaagagatag atccttatac tttatacata ggaaatttgc ccgaatctgt taatgtaaac
1141 gaggtgaaaa gtaaatttcc aacagcacga gtggatgtag gatacgcgca aaagatgaga
1201 aacacccgat atgcttttat aagatacaat agtgtagatg aagcgatatc agcttataaa
1261 caagcgcatg atttgatgtg ggatacaagg agtattattg ttagatttag acggcagcga
1321 ggtaacgctt gtcttcctgg agattctaag cctaacgtta agaaagttaa agaggagtct
1381 agtaatgctg cgcaagtgaa aaaggaacag agtatgaatc acattgaatt taagcctaat
1441 gttaagaagc tgaaggaaga aggaaataat gccaatcaga tgacgaaaga tgataagatt
1501 aatcacgcgg ataaatcatc gacgaatcaa gatgtaaata gcgttgaagc gcgattgcaa
1561 gacaatgaca attctaaaaa ggcacaaaat aaatcaatct tgcaagttca ggaacaaaac
1621 gaaaactctc attcctccgt gttaccgatt tcgattacat cagctaaaac agcacaagag
1681 caacaacagc aaccctggac gtcacaatct cctcagatac cttcagcatc ggaagcttca
1741 ccaccatgtc caaccaaggt aaatgctgtc gaagaaacaa taatgcttag tgagatcaaa
1801 gaggaacctc tagattatga agaaatggac atgcaatcgg acgatgatga cgatgatgac
1861 agcgatgaga agccggatgt cactgacaat gatgaggacc cggatgtcac tgacaatgat
1921 gagga
//