LOCUS LJ608893 1304 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c64814.graph_c0_seq1.
ACCESSION LJ608893
VERSION LJ608893.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1304)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1304
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c64814.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 482 a 212 c 205 g 405 t
ORIGIN
1 tacttgtata cataaagaaa gactaatttg tacacatatt tacaatacat cccattaata
61 taaataaaac taaattaaaa aattgtaaac ctttgtaata ttgtaagaga attaatttta
121 aaattacagc gtttgtcata tacatacaga ggtcttattg ctccagtatt agctcctttc
181 ggtaataatg gatctcttaa tttggacatt atatcacagt atgcgtcata tttagcaaag
241 aaaggtatca aaggtatatt ggttaatggc acaaatggtg aaggaatggc attgtctgtt
301 gccgaaagaa aacttattac tgaaacctgg gtaaaggtag cgaaagaaac aaagcaacac
361 ctgatgattc aagtaggagg cgcacctctt cctgatgtta tcgaacttgc gaaacacgca
421 agtagtctgt cagtggattc tatactctgc ttaccagaat tgtacttcaa gcctactacc
481 cctaaacaat tgatcgaata cttggaaata ataggcaagg cagcaccaaa gacaccgtta
541 ctgtattacc atattcctat gctgactaat gttaacatac acatgggaca atttcttcaa
601 tcaattggtg ataaaatacc ttcattcgtg ggtataaaat tcgctagcac aaacttagag
661 gagggagcgc aagcgttacg tgctgataac aaaaaatatg ttattatttt tagcaataat
721 cagttgataa acgctgcata tgcatcgggg atggattatt tcatgttaag cagcataaat
781 gtatttccgg aacttgtatt ggatcttctt gctgcttgca agagtggaga tacgttaaga
841 gctaaaaatt tacaagaaaa actttcaagc gttgtagttg ctataatgaa acatggtaat
901 cgagtgcagg ctatgaaaat agcaatggcc cttcttactg acattgacac tggagtatct
961 cgtgcactac ctaaatctgt tttttccgag atcgtagaaa ctgagataaa agatttaaca
1021 agcttaggat atcaaccaaa aattaaatat tactgacaat gaaaatattt tccttctcta
1081 ccttatcgta tttatatagc atatattatc ttttttacaa taaattattc aatcataaac
1141 ataaaataac gttacagtaa cacgcgcatt ttttaaaaat aaatatctct aacaataaat
1201 atctctaaca acccaaaaag attaattcat attgttacaa ttttgtcaat tttgtaaata
1261 tatatcataa atatattgta aattcatcaa aaaaaaaaaa aaaa
//