LOCUS LJ608823 1163 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c64378.graph_c1_seq2.
ACCESSION LJ608823
VERSION LJ608823.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1163)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1163
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c64378.graph_c1_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 382 a 195 c 215 g 371 t
ORIGIN
1 gagagagaga gagagagcaa gagaaagaaa gagagagaaa atgagataac tcggggctga
61 ccatcggtat acgtgaaagc tgaaaatggc atttagaatg ttatttacgt tgattatact
121 tcatacttta tcttcttcgt cgaaaaggtt gtactggctt aacatagctt tgcgtatatc
181 atgacaattc aatcatccaa tgagtacgga ggttcaaggg taaccttgaa tttcttaggc
241 atgtttggac gcacttattc gagtattaaa tcgactatcc aggacggggt tttcacgcga
301 ttacgatcgc tcgaatggct gtgaacggct aaataatatc ttttttcagt acaactgctt
361 ctaattgcac ttggaaaatc atggccacta tttgccaaaa gatacatccg ttcgagcagt
421 cacatttcaa agtggtgcta cctagcagag gtatatattt acagagatca tgtcgtacgc
481 cgaattcggc tgttatcttt aagatattcg tgatcgtatc tttgtatgat ttttgcgtaa
541 gaattttgat aacgaattat ttgcttttat atatatatag cagtagcaac agcatcttaa
601 atcaaactac tttaatacat tcgaattcac acgtttctcg caagattctg tacaatataa
661 cacagaaaaa taactgcacg gagaatggag aaaactgaaa aatacgtttc attatgtttg
721 ttagagaatc tataaaacaa taatgaacac taaaatacta tattactatg atggatttca
781 taacagattt agtttcgttc ttgtcatttt ctgaatcaaa tcgtttcata acagttcgct
841 tttcgccgat ggtgccccct taaagttacg tcttttcatt aagcctaaat atttctatcc
901 attataacac taagaacgct tacgcgtccg ctagcgattg aagatgggat taatatagat
961 ttgggatata acgcaaaaat attcttatca ataatcatat agtaataata attagtaact
1021 ataataataa tgcaacagca gaaacgcata tctgccagtg tatgcagtaa ttaaggaaag
1081 gaaagggatg ttagtagtgt cttatgtaca gtttcttctt gcgaacatac ttgtcagttc
1141 ttttcctgca aacgttagcc taa
//