LOCUS LJ606637 691 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c64024.graph_c3_seq2.
ACCESSION LJ606637
VERSION LJ606637.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 691)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..691
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c64024.graph_c3_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 232 a 114 c 121 g 224 t
ORIGIN
1 tatttttaat ttttatctat ttatatattt tgtttccata tttcagtttc gattgaagca
61 gtctggtatt gagaatttga tgtatatagt agaaaatatc gataagaact ccagattttc
121 tataccgctc ccatcattgt ttcaagcttc tgtgaattgt ctggttcaag atggctttac
181 tgtgaaatat acaaagaatc ataaagattc tatgtcgcac ttgtcatgta taacaaagat
241 tctaatcaaa atttacaagg ataagaggct tgttggatgc aagaaagaac atcttatcca
301 gacagataat gtaggtaaca caatgcgcct tatggaattc aaagaattca ataaagcatc
361 ttccaaacag aagacgttta gagtaagcga gatgtttatt cgccaattgt tacaattgaa
421 aggcatgtcc attgacaaag ccacagcgat cgtagaacgt tacgccacac cgcaaatttt
481 aatcatggct ttagaaaatt ctgataagaa tggagagcaa ttattggcag acattcaggc
541 cggtgacaaa aaacgacggc ttggacctgc catcagtaag gccgtttatc agctttacac
601 aatgaacgaa ttaagttaac taataaaact ctgcaataca atttataccc ttcattgtag
661 ttaattttat ttgttagtgg tatttcattt t
//