LOCUS LJ604446 1470 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c63251.graph_c0_seq3.
ACCESSION LJ604446
VERSION LJ604446.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1470)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1470
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c63251.graph_c0_seq3"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 457 a 287 c 296 g 430 t
ORIGIN
1 ggcagaatga aatcccctag gaatgaaaac gttcgtcggg ttgtcgcggg aatagtttgt
61 tatcggaggc cttgatctaa ttgtttgtaa atttgtaaac attaatcaga taaaccgcgt
121 tgattactcg tgcatccgga tatgagttta tacagtgttc aatcttttgc aacgtaacgt
181 attatgaggc tgcaacaaga aactaaccta aagggaacgt tttggacgca acatagtcgg
241 tattatcgtc tctgattgcc cacaaaatct tattaaacga tgagcgatgc gtatcaaggg
301 cctgctattg ttgctgatct gcatagcagg aagcagcatc gttttcattg ctttcagcaa
361 tcaacgacct tccattcaga ctttagtgac ggagactcac aaacaattac ggagcttcca
421 ggaaaatttg aaagacgttg aggagaaacg tctggtgaca gattccaaat atcttgcgtt
481 gcttggtctg gatggtcaga caagcactac accggtcagt ctcaagcctc agaatgtgac
541 ggttgtgtca cttgtaaggc ctggaaacga gcaatatatt tatggcttcg ttagaaacgt
601 cagccatttt ttgccaaata atagtattgt aatttatagc gtcggtttaa acgaagattc
661 tttgcaaaat gttaggctcg cctgtaattc ttcgagatgt aatgtgactc actttgattt
721 aaatccgttc cctgctcacg ttgaagatga cacgcttcat gtttatagac ctttagttat
781 tcaaacagct ttaaatacac taggtagtat aatctatatg gattccaatg tgcgtctgaa
841 ttcgtcagac atcgcaaaat atctctgtcc aaaatctgga attttgactt ggcctacaag
901 gcacgccatt agttcactga cgcatccaaa gatgtacgag tactttcatg cctctgctga
961 gagcttcttt tttctgccac tgattagagc atcacactta ataattagca acttcaaaga
1021 cattagggaa aaagtaatgc tgccttgggt ccagtgtgca ttaacgaggg attgtatctc
1081 ccccattggc gcacaatcgg cgggctgtag attcaacaaa aagccacaat atcgatattc
1141 tggttgtcac gcatatgaca cctccgcatt aaacatagtt ttgggattgc attttaactt
1201 tgatgataca tactatgtat acaaggagcg ggagacgtat tttaataaaa tccagcccga
1261 ggaaatcacc gaggagtacc ttatgattac gcggcaaaac aatgccaccg agaccaacgc
1321 taggaatttc atatcggagc attaaacttt ttttgatctc aatttacttt agatgatatg
1381 tcgaacaagc acaacttaat ttaagattat taagcattga attaaattat aataaatagc
1441 agaatgacca acaaaaaaaa aaaaaaaaaa
//