LOCUS LJ604151 872 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c63012.graph_c0_seq1.
ACCESSION LJ604151
VERSION LJ604151.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 872)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..872
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c63012.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 288 a 169 c 150 g 265 t
ORIGIN
1 gtagttcaaa tcaacaacgt tcctctcgca aaatgaatct aaatcgtaca actcatatag
61 ttccgaaaga aaactgccat agtcattcca cgactctcgt caaatccgga tctttctcag
121 gctgtaccgt ccatcaacaa ctatacgtag aaaggacgct tgtcagtaat cctacaccgc
181 tcaggctact ctgttgcaaa tcagttgctt ccacattgga aacggaaggc gaggatcgtg
241 attgtgctca aggacacttt gcttacgcta atgatatgtt cactaccgta ctgaataaca
301 aagaactaag caatcagcag tcgaatatag acagtgacgt ggaaatgaat agtcttggta
361 acaattcgtt gtacgaacaa gcctgggata attaccagga aaaatacatg agcgaaactt
421 acagcgagcc attagatgta gagacggctc gagaattgtt ggagtttgga gatgactatc
481 gactctttat agatagtcag tcggaatgcg catccagtat aagcgcaatt cctgctagtt
541 cgccattgcc taagattcgc acgtatcatg taggtcatgt actattattt tttctcgatc
601 aagtgtccat attctttcta taaaacgatc aatgttgcaa agaaaaagtt aatacataaa
661 taattactaa tttttatata cctatatgat attcgaatat tgtgccattt tctattatgt
721 ttattgatag aagtatacat tcataaagca tcttagatca ttacatcata ccttcataaa
781 acatcttaaa tcaattgctt agatcacagt cacgacaaat aaacttttca agcaatatag
841 aagtgtttta ttttttcata atatgattat tg
//