LOCUS LJ602745 2367 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c62669.graph_c0_seq8.
ACCESSION LJ602745
VERSION LJ602745.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2367)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2367
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c62669.graph_c0_seq8"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 800 a 406 c 519 g 642 t
ORIGIN
1 gatctcacaa gcacgacgaa attaatgaga tggatgtgca aaatgagatt tcgatacaaa
61 ttaaagatcc gaaagagatg acggaacagg agctcagaaa agaaagactg ttggaagccg
121 atagagaaat ggccaggcga aaggaggtgt ctagaatgga attggaagcg agaagaatga
181 aaagaggtga gaaacggcct atgagtccaa acaacaatcc agatccttcg attgtggagc
241 tgtcggatga aagcatcagt cctcattccg aaggcgcacg atcgaaatca gccgaatcta
301 gacactcatc cgaagtagag agaagtccac atgagaggtc ttctgagcga cattcatctg
361 attcttcgga atctagcagt gccgacgatg acgaatctaa cgaatcgaat aaaggttccg
421 ctggtgattc caatgacggt tcagaataca acaatccaag tccattgtcc gtcgatcgat
481 tagccaaatc cgatcattcg gatggtgact ctcctggaca tgttgattcc aacaatgctt
541 cgaaaaacat agaagaggaa aagaaagcag aggaaccgga gttaccgcca tatctgccgg
601 ctattcaagg ttgtagaagt gtcgaagagt ttcagtgttt aaatcgaatt gaagaaggta
661 cttatggagt cgtatacaga gcacgagaca aacgcacgga tgagatagtt gcattgaaac
721 gattgaaaat ggaaaaggag aaagaaggct ttccaattac aagtctaagg gagatcaata
781 ctttattgaa agcgcagcat ccaaatattg ttaccgtacg agagatagtc gtcggtagta
841 acatggataa gatatttatt gtcatggatt atgtggagca cgatttgaaa tctctaatag
901 aaactatgaa gcagaagaaa caagttttta tacctggaga agttaaatgt cttatgcaac
961 aattgttgcg cgcagtcgcg catctacatg acaattggat attacatcgc gacttaaaga
1021 catccaattt gctattaagt catagaggca ttttgaaagt cggtgacttt ggcttagctc
1081 gagaatatgg ctctccctta aggcaataca cgccgatcgt cgtaacgctt tggtatagag
1141 cccctgaatt attgctgtgc gacaaggaat atgctggact atatagtaca cccatagata
1201 tgtggtccgt agggtgtatt tttgctgagc ttctaagaat ggaaccacta tttccgggaa
1261 aatcggatat agatcagcta aataagatat ttaaggagct gggtacaccg agcgatagga
1321 tttggccggg atactctaag ttacccatag tacaaaagat tccgttcgcg cattatcctg
1381 taaataatct caggcaaaga tttagtttat ctttgtctga tttaggtatc gaattgctaa
1441 acaaattttt aacgtacgat cctcgtcaac gtgtgactgc cgaaaaggcc ttagatcacg
1501 actacttcat tgaagcgccg aagccaatcg atccgcaaat gtttcctacg tggcctgcca
1561 agtcggagca aggaagtaga accacgaacg cgtcaccgaa gccaccgagc ggtggcagag
1621 agtataaaca attgggtgac ggtgacgacg ccgatttcag caactccggc tttcacatgg
1681 gcttgacgga gggtggaaga gcgccgccgg ttggcggtgg ctttcacttg aaattttagt
1741 tgcaaaagac aattatatat tacaaattat aacaataaat tttttctaaa tagaattgta
1801 taatacatat atacatacta tacatgttat ttatctttgt gtaaaaaaat atataatccg
1861 tataatgtat atattttact tctatattgt agaagaaaag aaaacttgac gagagtattc
1921 atatacatac ttaagatact tatagcgttt catttttata aaataaagat gcttatgatt
1981 gttgtgtgca tcttatcgcg tatgacttta tacgaaatat atacctatat atttacgtat
2041 tagtttactg ttcctggaat gggttataat tcaccttcct caaactctta taaggccaat
2101 cggtcttgta aaactagggt tgggatctca cgcttgtcaa ctatgaatag ctttcgtact
2161 gaattaagtg atttttcagt attgaatatt tgttataaaa atcggaaaga caacatttgt
2221 gagattaatg tgacttaatc gtaatttatt ccacactttg cgattataag ttatagagaa
2281 agtgaaaaaa gtacaaggaa ttatgtaaca gctagaaaga ggtattaaaa taaaaagaat
2341 gcatatgaga aaaaaaaaaa aaaaaaa
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