LOCUS LJ598382 1829 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c61531.graph_c0_seq1.
ACCESSION LJ598382
VERSION LJ598382.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1829)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1829
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c61531.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 482 a 404 c 373 g 570 t
ORIGIN
1 tttttttttt ttatttttat aattgcttct tcttttattt aatgaatcat ttccacagaa
61 agttacaatg attgcaatta tgcgaaacgc aacaataaga tgatgattaa aataattaag
121 ttgctaagca gttttatgtc gtccggtata tatcggtatg tttgctattc gacaggaatc
181 gttctagaat atagttactt cgtatgcaaa atgcctgttt cttcgttgta taaatggatc
241 gacgcgtgca aaagcatcga tttctcggag tggtcggtct taaaaatcga tcgattataa
301 aaattcgtca aggcacatgt tgtcacatat aattgtcaag tcgaccctgt cgtccgtgat
361 tcaagtaaat cttccaagaa gtatcgagta cgatacgtaa aatgtatata acatacgtaa
421 ccaacgcgca taataaattt caaagagaca aaagaaaacg taaataaagt cctacgtgat
481 cgcggcgtct cgaaaatgtc agaaatttct acttggaata aggaaaattt tgttaaacaa
541 agaaatgttt acacaagagt ctacgtaaca aaaaaaaatc tctataagga aattcctata
601 tataataatt cctaatatgc atgcgagata ttctttctcg tacgcgaacg atgaattgaa
661 aaaaacatct gttcacttga tcattcgctt aagcctaaat caccgattaa cacttgttta
721 aatcgcgtca aaattatagt attttatctt atctgctttt ttgcacatgc ttattatcct
781 gcctcagcac gtcgaacgac aggtgcacac gcggggtgca catggggctc cacgcgaata
841 tcgaactcgg taaacgttag cgacacgtca cagaggcgat cgtcgacgtc gcccgatctc
901 ggagtgtcct agtgataagg gaggacagga tcctatagtc gaagatctac gacgaagatt
961 gcaatgtttt caccgagctt ccattgtttc gcccctttgc aatattaacg ccccactctt
1021 tctttgtatc gtttcatgag agcatgttgt ggccttcgag tattatcaca gtcagtagcc
1081 cttgatgtag gcggcgatgt gctttttctc ctcttccgag agaccgttct ttagcgttct
1141 acgcacttaa tcgcagaaat cacgaaaacc ctggcccatc agggttgata cccctccggc
1201 gtggtgttgt tctctcgagt gcgtgatcgc ttcagatcgg cgtgtctagt cctcttgcgt
1261 tcgcgtggtg tggttctggt ggcgggcgtt tttgtggcag tttttaccag ggattccaat
1321 agttcgtcaa cgccatcagc caagttaccg ttagtgcttt cgtccctgag caccgggccc
1381 agtggaatta tacgtccgtc tttcttctgt cttctccatg gtaaagtgcc gtggatactc
1441 tcgacgtctg aaatgtcact gccaagtagt tgtctgagtt ccgcgtccgc tcgatcctcc
1501 tttgtacgaa acttgccgac ctccgttatc atcttccctc tagtcttatt gcgttctcta
1561 tgattggctt tcttctcaag ctgctgtatc actcgttccc tagtggtcct gtactccaga
1621 gcaaattcag acacaattct gcaaaactcg tttggttttg tgtcttgtat cctatgcaat
1681 ggtataccga gccacagaat gaatttgcgg aaacgattta taatacgtct gtgcacgatg
1741 tctaagacga ttatcctttc ggcacaatcg gcgaggaaat cagacatctt gaccttcatc
1801 atcgtagaac catcgtgctt cgcaatgag
//