LOCUS LJ595592 1579 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c61119.graph_c0_seq1.
ACCESSION LJ595592
VERSION LJ595592.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1579)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1579
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c61119.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 456 a 356 c 435 g 332 t
ORIGIN
1 ttggtgaggt gtatggttgc cggaaagcgg acactggcaa gatgtatgcc atgaaatgcc
61 tggataaaaa gcgcattaag atgaagcagg gtgaaacgtt agctctcaac gagaggataa
121 tgctctcact agtaagcact ggggtggatt gcccattcat agtgtgcatg acgtatgcgt
181 ttcacaccgc cgacaagctg tgcttcatat tggatctgat gaatggcggc gatctgcatt
241 accacctaaa ccaacacggg gtctttaatg agccggaagt caagttctat gccgcggaaa
301 tgatcctcgg cctggaacac atgcaccgcc ggtacatcgt ctaccgtgat ctgaagcccg
361 cgaacatact gctggacgag cacggtcacg tcaggatatc ggatctggga ttggcatgtg
421 atttctcaaa gaagaagccg cacgcgagcg ttggcacaca cggatacatg gcaccggagg
481 tactctcgaa gaacaccaca tacgattcga gtgcggattg gttttccttc ggttgcgtac
541 tgtacaagct cttgatggga catagtccat tcaggcaacg taacaccaag gataaacacg
601 agatagaccg tatgacgttg acgatgaacg tcgggatacc ggaaacgttt tcacgggagt
661 tgcagtcgct gttggaaggt ttgctacaac gggacatcaa caacagactc ggctgccgtg
721 gcaacggcgc ggacgagtta aaggcgcatc cgtttttcag tggtatcgat tggcagcagg
781 tgtacctgct aaagtacacg ccgccgttaa taccaccgcg cggtgaggtc aacgccgcag
841 acgccttcga cattggctcc ttcgacgagg aggacacgaa aggaatcaag ttgacggagg
901 cggatcaaga cctgtacaaa gacttttctc tagtcatctc cgaaagatgg caggctgaag
961 tggccgagac tgtgttcgag acaatcaata acgaagcgga caagttggaa aataaaaaga
1021 aagcgaaaca aaagcaacgg tttgatacag atgagaaggg ttctgactgt atactacacg
1081 gttatataaa gaaattaggg ggtccattcg cgagtgcgtg gcaaacgcgt tatgcgaagc
1141 tgtatccgaa tcggttagaa ttacatccag aatcagcgac taagcctgaa ctcgtgtttc
1201 tcgatcaagt tgaggaagta ggggcggacc tacaacttgt taagggggaa cagtgcatcg
1261 tgatgcgtac gaaagacgcc aaaattgtac ttacaattgc cgatgagata agcttaaaag
1321 aatgggcact ctcattaaga tcggcacaca aatgctcaat ggagatgctc ggaaatatgg
1381 cgagaaaagc aggcaaaatc tacgggactg agcgggacgc agtaatcccg gcgatgcagc
1441 gatccacgaa cggcaactag cccactgtcg tcatgtgcga tgtcgcaccg tcatactcca
1501 gtcccactgc cctgcagcag cgacagcagc aacttttttt atactaaatg gataatagag
1561 agagagagag agagaccag
//