LOCUS LJ592172 748 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c59824.graph_c2_seq1.
ACCESSION LJ592172
VERSION LJ592172.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 748)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..748
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c59824.graph_c2_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 261 a 123 c 81 g 283 t
ORIGIN
1 atatatatat atatataata ttgataattc gagtaacata tgtatatcta cattattttt
61 cctctgagaa ccaagaagaa taataatata atctgttttg taatatttat aatataaata
121 gattctcctc tctcattcac atagttttac aaattaaagt atctattaat tttttgttat
181 gtataagaac acaaaaaaca cattttgttt tctcatgctt tgtataatct atacttataa
241 atatatctga tgtctctatc tcatataaaa tttctttttt ataaaattct acaaattaaa
301 attatgtagc gacataatgt gatattcttc cttaggaaga aaaatagaca caagattttt
361 tttgtatatc aagatctctt tttttattaa tggaccatca taataatttt tatttataaa
421 tatgacacac ctagattgag tctattgctc acagataagt aatccctaca aacttcttaa
481 ttaaaagtat atgatgtaat taggagtcaa atctgggact ggggttatat tattaagcaa
541 tagctccaac atagagctat cacactcgca atcatagtaa atatatattt atttagcctt
601 cttactttta atcttcctca tataaaattc caattcttta ccttccagaa tatagccatc
661 agctcgtcca cactgaccag gtctgcttgc tatacaagca aggacacgtc ccgttgcaaa
721 ttgttcttcc aaagcagctt caactttg
//