LOCUS LJ590372 1109 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c58930.graph_c0_seq3.
ACCESSION LJ590372
VERSION LJ590372.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1109)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1109
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c58930.graph_c0_seq3"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 266 a 275 c 200 g 368 t
ORIGIN
1 tttttttttt tttttttaag ttgctcaatt tctttaatct ttcatatatt taacatgagg
61 cagctgatca atattattga ttctgttgga aaaatatata catctcgcag agttattagt
121 tgaaaaatat aaatttgatt ataatcgctc acacataatt attataaatt ttcattataa
181 aacttgctgg cttaaaaatc acaattacag atatttataa ctgtttcttt gtttttaatc
241 tttcttatat aatatatttt aagtggaaat ttaaaatatc attaaaaatt ctctagcttt
301 atgtcttcct cttttctctt gattaacgtt cctattcttg ttcgagataa tctctcgcca
361 tctactatac atgacaaaaa gcatgtcgat gcaagcatga atttaacaat ggaagcaact
421 actttccctc tttgatcgat ttaatcgagc tgcctattca cttttctatc acgcgaccct
481 catctcgtta attgttcgtt ataaatgtca atgtcagtgt ctacatttac aactcaccag
541 tctgtgcgct ctttttagat taaagttcct ggcgcgaaga aatctgatga gaaaatcgtc
601 atccatcctg tgcggcagac actcgcctct ttcgtagatc atgtcacgta attcctgcag
661 tgtctgacac ttgacctcgt cggtctcccc gagcactctt ctagcatatt ccatgacttc
721 ctgcggcacg ctgaaatcca gactgatctg ctcgtcgtcc tgtagcagca gatcatcctt
781 gagctccggc atctcgtcgg cacccttgcg aaactctaga tcccccttga catcggcctc
841 ttgctcgcct agggttccct gatcccccga atccttttcg ggcttgtcgt cctgacggtc
901 gtgcttcgcc gggatcgtct ccggcccgac gccgctgctg atcctttggc tgtcctgcgg
961 catgataaca cacggacgga ccagtggcct atttcatccg agatttacag gatcgtggcg
1021 cgtctctctg acggagacac ccgtcgtggg gcgcgtcgag agcgaaatca cgcgcggatt
1081 caatcgcact gtcactcacg cggctatcc
//