LOCUS LJ589886 1712 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c58790.graph_c0_seq1.
ACCESSION LJ589886
VERSION LJ589886.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1712)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1712
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c58790.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 615 a 250 c 269 g 578 t
ORIGIN
1 tcatctgcta ttctccacat gtagtgttca aaatggacaa gagtaaattt tgtggttata
61 aaacaatagc tgacatgttt cgataatttg ctattagatt gatattattt ataataatgt
121 aactgtaaaa tatattatta aaagaaatta taataataca ataatttcac acattatcaa
181 aacagagaat aataagtact ttaatatatt gcttttaaca gtgttatcat tgttagttac
241 ttgtcaaaaa aaatccacaa atggcaccgt taactgattt actttcttgt agtataatag
301 agaaagactg taatggtgat atcttgtgga catggtcata tcctgcagta acggaatctc
361 agaagactgt agtcacaaga aaatgcaata tgaaattaga acatagttct cctcatgtat
421 ttgtgtgtgc gagacatggc cttgattggt tttatataca ttgcagtgaa gtatttgact
481 ctgataaatt accaaaaata aaacagtttg cattggttct ttttgcaaag gattttaatc
541 cacaaaagta cgaagtgctt tcacgagttc ttagcaagat gtattgcaaa actggcaagc
601 ctacagagat tttgcagtta tacctgtctg tattcactaa gggatcgtgt tctacacagg
661 agaatggaac atttgtctct gatgatttca atactcatcg tttcgcagct aataccaatg
721 tcaaagaact gattaaaaca ttcgaattag aaacaatatt gatatatacg gctctcttat
781 tgaaaaagaa aattattgta tatcatcata gtttggagca gcttcttaag tggataaaaa
841 catttcctgc gttgatgaag cacaggaagg ttactgataa tctttttccc tggattgact
901 tggtcaacga tgagttaatt gaattgaaga aatattcgca ctatgtggca ggctgcagta
961 atagctcgat atcatcaagg atagatctgt acgacctact tgtaaacatt cctgctagag
1021 aaattactgt agcaccacat gccaaagaaa gtcttacgat gacgaaaact cacaaagaga
1081 tagctttgtt catggttcaa ttgtgcgaaa atcaaaacta tacagaagca caagttatat
1141 ctgagatatc tgacaaaacg caagatcttc tgaatcagtt aacttcgtta gcaacagtgc
1201 aaactccaga tggcaaaaga atgatctctg ttgagatatt cagagagaaa aacttggcac
1261 cagcagtaga aaattttctt atgaatctag ccattgccga aaatctcttt gtattatgat
1321 cattttaacc aaagtttcaa cgtaatggag aatgagaata aggaataaaa tgtatttata
1381 tttatcattt tgtcttacat gttaatatat aaagaattta tttgttatat tctacctata
1441 cattttattc attcattgct ttttattctt attcaatgat ctgagccttc aatattatat
1501 taatattgtt aattatgttt ttaagaaaag taattataaa aataaaataa aatctatatt
1561 tctttgcaaa aattgcctat ttttctatat ataattatta aaaaatatga ctggtcaatg
1621 tatgtcaata ctcaatttct tagataagta acttatcatt ttctaattat gtcttattaa
1681 aggtcgtaac cctcgaaaaa aaaaaaaaaa aa
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