LOCUS LJ589188 759 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c57305.graph_c0_seq2.
ACCESSION LJ589188
VERSION LJ589188.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 759)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..759
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c57305.graph_c0_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 179 a 201 c 171 g 208 t
ORIGIN
1 gatctacact aatcaattcc atcagctttt aacaatttac ctttacatga ctaagaaaat
61 ttcctgtaga tttcagattg ccattcaact gtttcttaca ctgctgacaa cgcactgtga
121 cattggtatc ttccacccta gttacagcaa agtattctcc atccaataaa gcaggcaatc
181 taaccggaat catcttctgt tcggcattcg actctatatg cgtcacctgg tgagtctgct
241 ccacctgctg ctgctcctgc tgctgttgca gcattaactg ttcgtgactc tctcgacctt
301 gcactcgcat ctcctgcgtg tgtgcttgac tgttcacaga ctgaacgatg tcgcactgat
361 gattcgccgc gactatagat tcatcgtacg tctcgaacgt ttccatcttg ctctcgtaat
421 cctgtgtgaa ggtatccata acagcggagt gtatgcaggc ctcgctggtg gatatgacag
481 caatcgaacg tcgcggtgac actacctatc gtcggaatct tattgaattt tagataagct
541 gagccagata agagctgtcg cccggggcaa atatccgatc aaggttgcgg cgcccggggt
601 tacgtccgcg cgtcgctagg gccagggcgg ccgggtgaga aacgctggac gttccatacg
661 cgctgttccc ctccgtaaac acgtaaacga ataacaatag ttgcctccga caattcttct
721 attgtccgag tgtggtggcg gcactgaagt aaacaagac
//