LOCUS LJ588300 600 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c57941.graph_c0_seq1.
ACCESSION LJ588300
VERSION LJ588300.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 600)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..600
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c57941.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 249 a 58 c 193 g 100 t
ORIGIN
1 agaaagaaag agagagagag agaataaaag tagaaggtaa cggtgctgct agagagagag
61 agagagtgag agagcggaaa agaggaaaga gcgcgacacg tttcgaactt ttatgaccgt
121 ttacgcgatg tttcgctgac ggcagaaaaa gaaacgatac acagacacac acacatatac
181 acgtatgaat taaatataag aagtaatgat aataaataat aataaactat tgtgtgttag
241 gcttacagtc tttttcgtag ggcacgaaag ggtgagcgcg cgggcgagag aatgagagag
301 cgagagtaaa aacgagtgct agggaaactt ggtataaagt tgagaaaaag aaagagagat
361 agagagagag agatagagag agagcaagcg agtataagga acgtttggga tgagagcgag
421 ggagagaaag gtacagtgcg aatgagagat ggagagtgag agatgaaagg aatgatcaat
481 gatcagaaaa atcgatggaa aacgagttga gattcagaaa ttaacagcgc gggataatga
541 agacgaagat gagagagaga gagtgagaga gaagtgaatg agagagagtg aaagagaagt
//