LOCUS LJ587486 1400 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c57922.graph_c0_seq1.
ACCESSION LJ587486
VERSION LJ587486.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1400)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1400
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c57922.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 502 a 164 c 192 g 542 t
ORIGIN
1 acacacacac gcgcgcgcgc gcgggcgcgc gtgtacataa agatattttt attaattagc
61 aacatacata caaggatcaa ttattattta tccataaaag gaatataaat gcaagattct
121 cgatttgaag atataaccag ccatgctagg gttgtgtcca tatacaaatt gtatttaaga
181 tacttatttc attatctatg aaaaatttat taagaaaaca gatacttttt aatttgttaa
241 atatttcagg taacacagat acgtttattt ttcaaaagat gtttgtcttg ttttacattt
301 gttgtgaatt aatactcttg taataaaata aacttgtgtt gcacaagtgt gaaaattaga
361 ataagttaca aattttgtaa tatacctatt ttagttttgt aggtaatgta aacaagggtt
421 cggaaatttg tttgctttga gaggaaatcg tttcttgcaa aatcgtttct ttttagtgac
481 gtacgagatg ctatttagag tatgcttcgt taaattacaa ttatatcatt taatattaat
541 tgtaaaagaa atgtatatgt aatggttttg tcacgttgcc taatacaaat gaaatttatt
601 tcacgcatct attgtgtttg catcgtaacg agggtttgat caatgaggca atttattgta
661 gtaatttaaa cttcacgaat ttccaaatct ttaataataa ataaatttta ttatgaaatt
721 tgaatataca gatatagtaa ttatattaat atttttatat taatattatt aaaaaatcct
781 agtttgatga aaggttttca tattttatgg tttattatta attttcaacc taacaatacc
841 atctgcgtat ttaactcata aatttaataa ataacctttg cagcttttca gtttttccta
901 tcttgattat gtgatagaat ttgatagaaa tatttatcta tactcataca caaatacaca
961 acacatattt aaaacacatg tatccgtata catatattgt aggatataaa tacatacagg
1021 atgtatcaca actcgcaatt gcaagtttaa taatagattc tttgttgtaa tatgaaatct
1081 tatattaaaa ttttattagt tagttgaaat caattgaaaa aatggctgtg tttatttgtc
1141 ctacaataaa ttataatttg taaaaaaagt ttatattgat tctttataat gattcataat
1201 tctaatatta tagattgttt aatcgttttt tttttttttt ttactaaagc aacaaattga
1261 cttggaattc atcaaagaat atgtatatac agtagagtgc aaaagtttcc ggccagtgac
1321 attttgtact ctaaattatt aaagaacagc ctaaaaaaat tttcataatt atcaggtatg
1381 agtataagat ataggtaacg
//