LOCUS LJ584965 964 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c56799.graph_c0_seq6.
ACCESSION LJ584965
VERSION LJ584965.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 964)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..964
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c56799.graph_c0_seq6"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 273 a 160 c 145 g 386 t
ORIGIN
1 gttattttaa cttaaaattt agattgggct gtctgggaca tgcgaaaata ataaaattat
61 cattactgtg taaagtgtca aatatataat cctattaata tagacacgac ttgtgcaatt
121 attgaaaata attatcgcat aaaggtatca atttttttaa ttatcgatac ggtcctgata
181 aaatgtaaga tttcgcacgg atatttaaaa ttataattta tattataatc taaaatgtat
241 aattatttta attataataa tcttcatctg cttttttgct tgtctagttt ttattgaaaa
301 ttttatagaa gttttaacat gctttgcacg ttactttttt ttctcctccc tactttcctg
361 attttctgga ggcttcatta gacttttaaa tagcttcacg atataaggat cctcgtcgca
421 ggcctttagt agttttttat tttcctgttc cgaagtcgat tttctgttct gctgcttcaa
481 atttaccgac gtcgtctcga tctcgatgtt ttcttcgttc tgcgtttcgt cattcattaa
541 gccctgtgta gtatccgcta tttctctatc gggtttagtc atccgttcag gttcgcttgc
601 catgactatt gactgtctgc cgaaatattt aggcctcggg aaacagagat ttgccttgct
661 aaactttgct ttgctttaat cagcactctc gccttctgtc aactcgtggt ttaatttcct
721 tttcgattgt aactgtgaaa gtgcaaatat gaaattcaaa taactttttg cttccaagaa
781 aaacgattac tttatttatc tttttttttt ctttcagcaa ggaactgtta tcttgatcaa
841 aggacatttt ttgaataatt gttttaaaat atgcgcaaaa aaactcattt atcgtgtact
901 gaaaagaaat tcatgctctt tcggtaaata ctgtaaaatt ttatcgaaga aaagtcagaa
961 taat
//