LOCUS LJ584160 820 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c55695.graph_c0_seq1.
ACCESSION LJ584160
VERSION LJ584160.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 820)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..820
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c55695.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 270 a 143 c 146 g 261 t
ORIGIN
1 gagtagaacc gattgcgcga atgatcgaga gaaagtttgg cgaattacgt tccattagat
61 tttcctgttg gcaagaataa atgttaaatc agtcttgtaa gtctcaacgc cttaggtacc
121 agcggtagca atcgttggta tttgaacggg aataatgctt ttgacatttg aaacagcttc
181 cataactatt tctggaattt tagaagcagc aaatttatgt acgttcagcg attgtatatt
241 agaaacgctt ggcacttcaa tgttatccac attaaacata aaattaaccc acagcctgtt
301 atgacgttgt tcaaggatga aaataacttt ttcccgaaca aggctcacgt ttttatctcc
361 cgaggttgaa attcaatgtg aataattttt ttgtctttga gaaataattt cgtaattcca
421 gccacgtctg tccttcttaa gatttcctag atttaacgaa aatcactgag tgtaaaataa
481 tgactggaat aaaaatatgc aatttgcatt cctcgctcgc tattcattca gataaggtgt
541 tgaataaaca tgacgtagac gtagaataaa cgtttataga tcgcattctc gctttcaatt
601 agcaaacatt tacacgtggt agcggaaaca tatgcgtgtt attgcgttta tcctgaagtt
661 gagtctagca tagtctagca tagtcaacaa gaacaaatta atagtgagca tatcagtttt
721 tccaggtata tctactattt tatatcacac tgtcacgcca tgaaataaaa aataaaaaaa
781 tagaaaaaat gcattgtggg taaatattct taccccctac
//