LOCUS LJ583738 1152 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c55968.graph_c0_seq5.
ACCESSION LJ583738
VERSION LJ583738.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1152)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1152
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c55968.graph_c0_seq5"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 419 a 180 c 241 g 312 t
ORIGIN
1 ggcgaacagt gcgatcacga acaaaatggt gcaagatctg gagataacag ctttcgttcc
61 aaaatataag atcagcagga aggtagtcat caaggagatt ccttatgata tgtctatggt
121 agaaatcaag gaaatcatcg aggaagaaaa ttctaacctc ttgatagcaa atctatttag
181 actgaagcgg cgcaataaaa ataccggaaa aatggaggat tcagaaacag tctgtatgga
241 gttgaaaggt gattttatcc ccgaggaggt gtcaatccta aaagctgtta tatcagtaaa
301 gccgtttata cagccggtac gtgtatgttt taattgtgga cgtataggcc acgctagcaa
361 agtctgcaaa aacccggctg cttgtctgac atgcgccggg aaccaccaat ctacgcggaa
421 agaattgtgt tcaacggtta aaaaatgtat aaactgtgga ggcccacacg acactttaga
481 tcgtgaatgt catgtatata agaaacacca tgagattgcc agagttatgg catacaacaa
541 ccttcctttt ctcgaagctc agtctcttgt ggagagggct gatggacctg agaggagtgt
601 gccaaacagg acaccgagag atttctccgt ccttctgtcc agggatggat ttacgggtgt
661 taatcgcaga atgattcagg gaacactgga agagaacgct tcatatagac tggcagtttt
721 aaaagaaact aaaggcagtg ttaaagatca gctatgtaac attatagaga taattttatc
781 agatccggat gtagaacttt tatgtgaaag aattaaaaaa actatagatt tgcatgtaac
841 gaacaatctc aggaaagtta aaggtaatgg atcgaacaaa taaatttaat tctttgaaaa
901 tagctggaat tttaaatcta tgatgtcacg atacaacaaa ttaaagggat gtgccggata
961 acgaatgtat cggataaaga attaaaaagg tatatataca aatttgcatt acaagactaa
1021 cattgttttt gcaattttac aatgttacag taaacgttgc ataatgctca ttagcaacaa
1081 agaaattatt ttatagttat ttttttaaat aaagtatttt ataaaatctt cataaaataa
1141 aaaaaaaaaa aa
//