LOCUS LJ583737 1143 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c55968.graph_c0_seq4.
ACCESSION LJ583737
VERSION LJ583737.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1143)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1143
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c55968.graph_c0_seq4"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 426 a 176 c 239 g 302 t
ORIGIN
1 ggcgaacagt gcgatcacga acaaaatggt gcaagacctg gggataacag ctttcattcc
61 gaaatacaaa atcagcagga agatagtcat cgaggaaatc cctgatgata tgtctatggc
121 agaggtcaag gaaatcgtgg aggaagaaaa ttctaatctc ttaataacaa atctatatag
181 actcaagcag cgcaacgaaa ataccaggga gatagaagat tcagaagaag tttgtatgga
241 gctaagaggt gaaattatcc ctaaggagat gtcaatctta aaacttgtta taccagtgag
301 gccgtttata cagtcgatac gtgtatgttt caaatgtgga cgtataggtc acgttagtaa
361 attctgtgag aatccggctg cctgcctgac atgcgctggg gatcatcaat cgcgaaaaga
421 gccgtgttca gcggctaaaa attgcgtaaa ctgtggacgt ggacacaaca ctttagatcg
481 tgaatgtcct gcatataaga aacaccaaga aattgccaag gttatggcat acgacaacct
541 tcccttcctc gaggcacagt ccttggtgga gagggactac gatggacttg tgaggaaagt
601 acatgactac aagacactga aagatttact cctttttcca tccaagggtg taaatcgtag
661 gatgactcag gggtcaatgg aagagaacac ctcatataga ctagaagttt taaaaaaaac
721 taaaggtggt gttagagatc agctaagtaa cattgcagag ataattttgt ctgatccaga
781 tgtagaaatt ttatgtgaaa gaattaaaaa aactatagat ttgcatgtga caaacagtct
841 cagaaaagat aaaggtaatg gatcgaacaa ataaatttaa ttctttgaaa atagctggaa
901 ttttaaatct atgatgtcac gatacaacaa attaaaggga tgtgccggat aacgaatgta
961 tcggataaag aattaaaaag gtatatatac aaatttgcat tacaagacta acattgtttt
1021 tgcaatttta caatgttaca gtaaacgttg cataatgctc attagcaaca aagaaattat
1081 tttatagtta tttttttaaa taaagtattt tataaaatct tcataaaata aaaaaaaaaa
1141 aaa
//