LOCUS LJ583039 553 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c55528.graph_c0_seq1.
ACCESSION LJ583039
VERSION LJ583039.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 553)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..553
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c55528.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 155 a 140 c 138 g 120 t
ORIGIN
1 ttcgacagta caagctcaca gagcacgtgg atctgccgaa cgatcgtatc tacaccggag
61 agatcgcgcg tcttcattcc ttcacgaatc agagaccgcc gtatgatgcg aagaacccat
121 ttttggctcc tgtgaaaatg aatcgcgaat tgcacggccc ggcgtccgac agatcgtgca
181 tgcatataga gttcgacatc gacggctcta agatgcgtta cgagacgggc gatcacttgg
241 ccgtctatcc tgtgaacaac ccagagctag tgaacaaaat tggcgaacaa tgcggcgtga
301 atctggatac tgttttcacc cttacgaata cagatgagga atctacgaag aagcatccgt
361 tcccttgccc ttgtagctac aggactgctt tgacacatta tttagacatt acgagtaacc
421 cgcgcaccca cgttcttaaa gagttggcag agtacgcgac tgatcccgca gaaaaggaga
481 agctgaagct gatggcgtcg accaccgtgg agggcaaagc ggcctatcaa caatggataa
541 ttcaagataa tcg
//