LOCUS LJ582954 575 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c55827.graph_c0_seq1.
ACCESSION LJ582954
VERSION LJ582954.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 575)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..575
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c55827.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 212 a 70 c 112 g 181 t
ORIGIN
1 gcagatgaag cttttcaact aaacaatttt acattaagac catatccagg gaaaacattg
61 actaatgagc aaaggatttt taatcatcga ttgagtcgag cacgaagagt agtagaaaat
121 acattcggta ttatggtggc acgatggcgt attttttcaa aaataattaa tacatctttg
181 aaaaccagta aaagtatcgt gaaagcttgt gtgatcttgc ataattattg tatggacaaa
241 gttggatatt gtagtaaagg ttttgctgat gaatttcatt ataatggaca acttatccct
301 ggtgaatgga gaactatgat acaaaattct ggtatagcat cattacgaaa tgatagcagt
361 aatactcatt cccgttttgc agctgctata agggaagatt ttaaaaatta ctttttagat
421 gaaggagcag ttccgtggca atggaactta gtccacggat ggtagtccac ggagtgtaaa
481 tatactttga aataagttag attacgtttt atatcaaatg tgtatgtaaa tgtgtgtata
541 aaaaatataa tataatttag taaaaaaaaa aaaaa
//