LOCUS LJ582252 925 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c54444.graph_c0_seq1.
ACCESSION LJ582252
VERSION LJ582252.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 925)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..925
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c54444.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 326 a 141 c 117 g 341 t
ORIGIN
1 tttttttttt tttttgcaat aaaagcagca ttacggcgca tcctgctgga tagaaactgg
61 gttacacgct gagtcgtcgg cctaaaaata tatccgcggc aagccagcag aaacatgtca
121 gcaagacgca ttggcgctta agcgggaaat ttcagcggcg acatcatcat taacgcgagg
181 caacatccgc aggatctttg taccattagc atcgtaactg tcaaattatc ggtagaagat
241 tctttaacaa atttacaatt tatctctcgc cagaattcga aaagtattgt ggactcgcgc
301 aaattttcaa catgcgatac taaatgttta ccaatcgaga atagtcgatc catcaggaag
361 agtcagtttg tcataagtgg agatgtacga attatgcgat ttctgtttga atctgaacta
421 ctcgaaaagt tcaaaactat ctttattaca taaaaaaatc ttttttatta tatgtattaa
481 aattctatcc aacaataatc atgtttgaat aattatatta attaaaaatt atattataac
541 gactctagat tcaatttagc atcaaaatat acttgattcg cgtattttaa tttataatta
601 taaatctatt gttttcgata tttgtaacaa atcaatttta ctttaaatct atttttatta
661 cataaaaaaa aatctttttt tattgcatgt attaaaattc tatccaacat taatcatgtt
721 tgaataatta tattaattaa aaattatatt ataacgactc tagattcaat ttagcatcaa
781 aatatacttg attcgcgtat tttaatttat aattataaat ctattgtttt cgatatttgt
841 aacaaatcaa ttttacttta aatctatttt tattacataa aaaaaaatct ttttttattg
901 catgtattaa aattctatcc aacat
//