LOCUS LJ582214 812 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c54566.graph_c0_seq1.
ACCESSION LJ582214
VERSION LJ582214.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 812)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..812
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c54566.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 220 a 151 c 123 g 318 t
ORIGIN
1 aagaatgaaa tgcttccttt tcccgtcgta aggaagtaag gtattcttgt tcctcgacag
61 atccgccata aatcaaaaaa tatactttca gatctaatga cggattatta ttttgataca
121 cctctaattg tcttacggta ccaatatcag ctacgtataa aataatattg ttcggcgtat
181 gctcagctaa cgctcgttgt aaagccatcg aatctcctcc cttctttata gcttgtatga
241 aaacaatggg tgcggatgtc gcgcaattgg tcaaatctaa atctgccagt tgcgagcatt
301 cttcaaataa tgtctgatgt tttatatctt ctgtggaagt acttggagtt tcgtctgcgc
361 atttttgcgt caaagtgagt acataagtgt cttgatcatt ttgtgtatct tcatcggtat
421 tattttcaga tgttgattgt tgatctttca cattttttcc attattgcca ttttcctttt
481 gttctttatt atgcgacaat tttttcaagg cttcataaaa taagtattta tttgcaccca
541 tagttaaaaa attctttaac tgtttacata tattgttatc atgtactaag ataagaactt
601 tatcaatatt ttcactatcc ttttttttat gtttctgctc ttgaatctca gacaaaactt
661 ctgacaaagc tatccatttt ggatttggtt ctggctttag ttcattctta tttgtataaa
721 ctctgcttct ggcatattta aataaatttt cgacttcatc taacattatc cagccactgg
781 ctttcacagc atattccata gttcgtaaac ga
//