LOCUS LJ580748 1384 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c54489.graph_c0_seq1.
ACCESSION LJ580748
VERSION LJ580748.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1384)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1384
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c54489.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 406 a 252 c 286 g 440 t
ORIGIN
1 ggaggaagag agagggagaa gcaaggaacg agagagatcc atgtatttcg cggagaatcc
61 aggtgacgtc acgggatacg gtttatttat aaaagccgct gacgacgttg cttattgtta
121 gagtcatatc ttgtactttg agcctacttg agccagctcc tggcacgtcg cagaagtcgc
181 tgcggatcga cgtgtcctag ttttctcgcc gttatccttt cggaacgaac atatatcttg
241 gcagatatat ttatatatat aaggacagaa gagtaaaaaa caaacatgag tctacagtgg
301 acgctcattg ctggttttct ctatatcgag attgcgattg ttcttctcct agtattgcca
361 gtagcttcgc cgacgagatg gcaaaagctc ttcaagtctc ggttcttaca aagtataaat
421 aatcaggctt ccatttactt tgtgattttg ttgggtgtcc taatcctctt tctattggat
481 gccattcgag agatgcggaa atactcctcg agcttggatc acacagatcg tcatcaattg
541 aaccttgaaa tgcaagaaaa catgagattg tttcgtgcac agaggaattt ctatatatct
601 ggttttgcat tgttcttgag tttggtgata cgccgtcttg tcaacctaat ctctgcccaa
661 gcttctttgc tcgcgcaaaa tgaagcggct atgcgacagg ctcaatctgc gacgacaaca
721 gctaggagtc tgttgtccca gagaacgatt ggtgagagtt tgcagaatga ctccaacgag
781 gcgcacgata aagccgtctc ggaactgaaa agtcaaatta aggaattaca agctaagaat
841 caggacctcg agagcaattt gactaaggaa aagaaggata aagaagcgat aaaatcacag
901 gcggaatcgc ttacaaagga atatgatcgt ttgactaagg aacatgcgaa actcttgcaa
961 tctagtgata agaaaactga ttaaacaatt gaggttttct catttacctg ttttttccta
1021 atcattattt gctcataaat tctttttgtc catgaaaagt tgtccttttg taacgttata
1081 ttacataatc tgtattacat aatatgcatt atttaaacgg gagtcacatt ttacgatatt
1141 aaaacattta tatactttcg ttagaaagat tgtatacaaa tattagtatt gtgtgatggt
1201 gttatgtgcc tcatgataca ctgtacatcc tctttccaac tttgtgcgct gtcctgtgtg
1261 gacaaagtcc atatcagtct ttcttaattc gtgatatatt tcttgattcg ttacttatat
1321 tatcattaac aaatgtaatt ctaagaattc tataaattaa agtttttgtt atagttgctt
1381 tgta
//