LOCUS LJ579987 911 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c53587.graph_c0_seq1.
ACCESSION LJ579987
VERSION LJ579987.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 911)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..911
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c53587.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 358 a 130 c 160 g 263 t
ORIGIN
1 gattgcattg catgaaccat atgagatacc atgagagcat aacctctgtc atttgtatct
61 ttaaccttta cctgtaatat aattttagta cgaaaaagtt atgttgaata aaagttttac
121 gattcgtaca tataataaag gaataagata gtacattgag gagaagaaag cgctgttaga
181 atgaatttta catctgattt ttaatatgca taaatttaat acgctgaagc cttcaaagtc
241 accattagga cgtctttatt ccaactgaag tgaaatcggc gtactacaag ttatctcttc
301 agtatcatcc tgataaaaat aagagcgggt acgcaaaaca aaagttccaa gatatctcgg
361 aagcctacga agtactcggc aatcatgaac tgcgcaagaa ttacgatcga gatacaataa
421 ttcgtcaaca accgatgtca gagactgttc aagagcctat gtctcaatat agagacaagg
481 tctattcggg aagttcgaaa atttataatt ttgacgaatg gacgcaggca cattatggaa
541 ggcaaatgca tatgactcgt ataaggaggg atatgtatga gcaatacaaa cagatggaac
601 agttaaaccg tgagagaaaa tcttctcgca gcatggaatt tgttatatta ttgttgaccg
661 caatggtagc tgttatatat atgcaacaaa aggtagatac accggtacct aaaactgaaa
721 aacatataga agaaattaat aagaaaaatt agttaatgta tttattttga attgtataaa
781 ctgatatctg ttttaagact aaatgtacaa atttattttt atagtcaacc tcttattgtt
841 atagtcacta gtaaaataaa gaaaatatta aatagattac agtaaaaaag ataaaaaaaa
901 aaaaaaaaaa a
//