LOCUS LJ562183 451 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c41100.graph_c0_seq1.
ACCESSION LJ562183
VERSION LJ562183.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 451)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..451
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c41100.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 142 a 81 c 84 g 144 t
ORIGIN
1 gcagtggtat caacgcagag tgctagctac tcgtgccgac ttagcaaaga tcagcttgac
61 gaatccggtg tgcacggaga tcgacgaaaa aattgcgtta tccagacgag tggagaagca
121 ctggcgtcta atcggatggg gtcagatttg cggcggtcaa acaatagacc ctattttaga
181 tcggaaataa tgccgatact tatggatcta attttcctca agtacgttat ttctgttcgc
241 aatctgttca caacgccacc attggtcttg tgtaatattt gtaataaaaa tttgaaccta
301 gttttgccaa gattaatatt ttatccatct aattgctcta caatccaagt tgggatctac
361 gtataaaagt tttttaaaat tattttactt atatattggt gtaatcaatc tatcacattt
421 ctaaaagata aataaaataa atattctatc a
//