LOCUS LJ561896 1996 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c39893.graph_c1_seq1.
ACCESSION LJ561896
VERSION LJ561896.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1996)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1996
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c39893.graph_c1_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 644 a 322 c 380 g 650 t
ORIGIN
1 agagagagag agagagagtg tgagagagtg agaatgttgc tgtacacgtt gatcggcggc
61 tacatgctca cctcggtgat cctgttcaag tatccgaccc tgctgcacaa gaaaaaaaga
121 gtgaagtttc tgtgccagca tatcagccat cggggcggag cgggcgagag ctatgagaac
181 acgatgtgcg catttagacg agcagtggct attggaaccc aaatgttgga attagattgt
241 catcttacaa gagatggtga agtagtagtc tctcacgatc agaatctttt acgcagcact
301 ggtgtagata aaaatatctc tgaattggat tacaaagatt tgccactctt aaagcaacgt
361 ttaccaattg attttgagcc agctgtagtt ggaacagata tggagtatgt tggttctgcg
421 agggaagaag atcgacgatt tgccttgcta cgagatgttt ttgaggcttt tcccactatc
481 cctattaata tcgatattaa aatcaacgat gatcggctta tatcaaaagt ttctgatctt
541 ataaaacaat acaatagaga ggaatataca gtttggggaa actttagtga tgaggtcaca
601 cagaaatgtt ataaaatgaa tccaaatgtc aacctactat tttcaatgca acgtgtgaca
661 atgttgatat ttctcatgta tactggcttg ttgccatttg taccactaaa ggaaacacat
721 cttgaaattt tcttaccttc aatctatttg cgacgcaaag gcgggccaag tccgacattt
781 ttaccactgg aaaaattagt agtacgtaca attaatgtgc tattaataag gccatgctta
841 tttaatcatc taagagcacg gggtatacat gtttactttt gggttttgaa caaagatgag
901 gagttcaaaa aagcattcga cttaggagca actggtgtta tgacagatta tccaacaaaa
961 ttaaaattat ttttaaagaa ccagccaatg gaatgaagtg catagttaca tttttaaaga
1021 gtatacatca gataacacga actgttgagg aaatttgcaa agttatttat gtctgtaaag
1081 agatatctgc cacataatgt gtgtgaagat atataagcta ttatacggaa aggacaaagt
1141 agtatatttt ttataagcaa agcagaacta tttgcttacg ttctgtgtat aaatgccaac
1201 ttgaacaaat tttgccagaa ttgcgacagt ccgtacaaat cgattcatta gtgaaattac
1261 atatacaatg tattgcacac gcactgtagt tcactatatt actgttacat taatcatgca
1321 agcgtccatt cacggaataa gattgctctg gcctcgtaaa tctctaattt attcatcttt
1381 tttcattttt ttgtcgatga agcataatga ggcttttctt tttaattgaa ttatgattaa
1441 tttagaagta taaactagta tattgattat cagtattgtc aattattttg tgcacaatga
1501 gtaatctatc aagcgacaat ctgcaggtaa taatttaatc gagcgatttt tttatagtat
1561 gtaatacagt catatatacg cacttctatc taatttgcta gtcgaatcta tttatcatgg
1621 tcttagattc cgtatattgg aatattctta tttatgggat aggcatgctt tgtctcctca
1681 taatccgaca agttaatatt ttctaatctg gtgagagaat ttttttacca aaacttttta
1741 cttacaatat ctcctctttc atatttataa aattattgtg aggaaacaaa ttcgcacgtc
1801 ctaagaaagt ctgcgtgcgt gtgtgcgtgc gtgcatatcc caatttttag tacaaaatat
1861 ctattgatta ctatatatct ctctggggcc agtgttagct tagcccagca ttcagaggct
1921 tgaaataaca aatagtctga tctatggtgc atttgttaaa taatttttaa cattttcatg
1981 aaaaaaaaaa aaaaaa
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