LOCUS LJ559181 1219 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c39308.graph_c0_seq1.
ACCESSION LJ559181
VERSION LJ559181.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1219)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1219
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c39308.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 477 a 156 c 180 g 406 t
ORIGIN
1 aacacttaca caaataactg ttaccgaatc agtatcttct gcttataatg tagtttattt
61 tgatcttgaa actggtggtc taagtatgac tgacgacatt ttacaaatag ctgcaatatc
121 agaaaatcgc gaattcaatg tttatgtaaa cccgacgcaa cctatctcac ctgctgcaat
181 gaacataaca ggtttaagta ttataggagg acatttgcat cttaataata aagtagtttc
241 cacgattcat ataaaagatg ctttgattgc tcttcatcaa tttttaagtt gttcagagaa
301 aataaatgta ctcgtcgcac ataacgctaa gttcgatgtt ccgcgactac tcagagcaat
361 ggttaaaaat aatgttcact tagatattac gaatatagtt ggatttgttg acacgttgac
421 aatttttaaa aaagcttttc cagaacggaa aggtccagga ttgtttaaat tgtcaacatt
481 agctcaagac attttaggtc ctgacgttct ggaaaacttt cataatgcaa ctttcgatgt
541 ttcagttctt cagaagttaa ttaaatttct taaaaaagaa gatgatttat taaaatacat
601 gaaaccatac gaaacttgtc tatcagatca attagaatat gataccatta aggcaaattt
661 agaaaaatta catttattaa aaggtgttgt ttcccaagat ttattaaaaa ggatggccaa
721 acaaaatatc agttttgaaa atttgaaaga agtgtataaa aatggaggag aagagtctgt
781 gtacactttt tgcactgcaa aatgtgaaag tggaaaacca aaaattacga gagataaaaa
841 agctataaat aaaattatta ctaggttaat acaataagct tagaaataaa ataaaatgtg
901 ttacatgatg acagaaaacc caaaattaca agataaaaaa gtttagaaat aaaataaaat
961 ttattatatt gtgataaata gaaataagaa atgtggtaca ttgtgataaa tagaaataaa
1021 agaaaatgtt atattctaaa ttctgattat aatccacatt atcaatattg taatagatag
1081 tttttatttt tctattccag ttataaataa actttttcat tcacaaaata aaggtcaatt
1141 atgtataaat caggtgtatt tattttcctt aacacatgca tgtatatata atttatatat
1201 tattttattt aattttgag
//