LOCUS LJ558170 567 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c37886.graph_c0_seq2.
ACCESSION LJ558170
VERSION LJ558170.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 567)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..567
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c37886.graph_c0_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 204 a 80 c 78 g 205 t
ORIGIN
1 aagcagtggt atcaacgacg aacacgatga atttccaggg gaatatcagt tgctttcaca
61 atcaatataa attattaaag attcggtgct taatgtttta atctgaaact acttaggtga
121 ttaaggtgtc catattggat ggctattttc gttggcaatt tcgacaagta tcaatttata
181 aacttttgat gattctaatg cattaacttc tcatgtaatt cataaacgtg cgtgaaattt
241 ctaatattaa tttctaaaac gtcatttttt cgtacttttg cgcgctatat tgcaagagag
301 atcttgttta tatacagtgt acatgtattt ctttatacat aatatatata tatgtagata
361 agacacacac aatattacat attcatgttc tctagattga atgcagtaac tttttttata
421 ttatttcccg ttcacatgta aatcataagc ctcaaatgca ttataagagt ctagcaaatc
481 gaaaaatagg atatttttta acattgtgca aaacttttat ttaaacaaat aaacaaataa
541 cgtttttgtc aaaaaaaaaa aaaaaaa
//