LOCUS LI516706 2236 bp mRNA linear TSA 12-MAR-2016
DEFINITION TSA: Lasius neglectus mRNA, contig: c31562.graph_c0_seq2.
ACCESSION LI516706
VERSION LI516706.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042123, DRR042124, DRR042125, DRR042126,
DRR042127, DRR042128
BioSample:SAMD00035781, SAMD00035782, SAMD00035783, SAMD00035784,
SAMD00035785, SAMD00035786
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Lasius neglectus
ORGANISM Lasius neglectus
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Formicinae; Lasius; Lasius.
REFERENCE 1 (bases 1 to 2236)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2236
/db_xref="taxon:111072"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c31562.graph_c0_seq2"
/organism="Lasius neglectus"
/tissue_type="whole body"
BASE COUNT 712 a 345 c 439 g 740 t
ORIGIN
1 ggtatcaacg gcaggtacag agcgatgata actggaaata atccggtgtc ccatgtgagg
61 caatttgatg tattcggtat tatgcgccag gctataacta tttataaaac cagctcggcg
121 gacggaatat aagatggtag agcaaacatt actcgtggct aattggatat atttcgttat
181 tgcttctttc agaatctgtt aaaatttttg gaaacattct ttctccgatg gagcagtctc
241 gttcgtgaga atttgagaac agccagaaca cattcaatta aacatggctc ttttaggagc
301 gcaattggtc atcactcttg taatggtcag cgtcatacaa aagttaagtc cacatttttc
361 tttcgcaaga tggatcttgt gttctactgg attgacacgc tatctgtatc cgacagatca
421 acaacttaga gcgttagctg gtgtgccaaa ggagaaacca aagagaggaa aacacagtga
481 aaatggcaaa gtgggagatg tgtttcatgt tcctagaaat ctagatatcc agctcgaaag
541 tgcacaagtg actgcgcttg atgttgtaca tttaaaatat tatacggaat ttcaatggct
601 gttggatttc tctctatatg ctactgttgt ttatataatg acagaggtat acaattattt
661 atatccaatc aaagatgaga ttaacctcag tgtactgtgg tgtttggtag ttttgggttt
721 tgcatttaaa gtgctacttt ccctctgggt acaatatttc aagggagagg aaagtgtagg
781 tgaaagatct acatgtatag ttactggatt tgcgtacctt ctcattgcta tgatggtact
841 tatagtcgat gagaataagt tggaaattgg cttggaaaat gcatatacaa gttttaatta
901 tagtgcttct tggtttttac gtagtcaagg actctcttcc acggggccag cttcaaaaat
961 agttgtaaag tttttccttg ctatatggtg tggtctattg ggatcattat tcactttccc
1021 aggattaagg gtatcaaaga tgcattggga tacattaagg tattatagag accacaaact
1081 attgttgtta gtagcaaata tcagctatgt ctcaccattg ctactggtga gcttatggat
1141 tacacctatt agcagggatt atttgactgt tcgaatattt agcggtatga ctagtccatt
1201 aatgacagct gcaagctttg aaagcatgag attgattatt atcgtcgttg ctgttttatt
1261 aaagctggta ctcatgccaa tatatttgca atcttactta aatctcgcca ttcaaagatt
1321 agaaatacag aaaaaagagg ctggtagaat aactaatgtt gatttgcaga aaaagattgc
1381 agctgtattt tattatctat gtgtagttgc gctacaattt gttgttccaa taattatgtg
1441 tctatttttt acatttctgt acaaaacact cggtggtttt acttgggatg gtatcttaaa
1501 aggcacacca gaggaagaga gtctagtgac cgaatcacca aagccatcct tcatgcacgt
1561 gaacactgat aatatgaata ttgataagac tgttatagaa actgctgaag aacttcaact
1621 tgcgttaggt tcattgaaac agatctttac cagagatgtt tacagaggta tcttaggatt
1681 ggcaacatgg tggagttgct ttgcattgtt tgcgactagc gctatgggca tgttttatca
1741 atcatatttc tccagcatat gaagagatct attaagaaaa aatcgagaca tcgcacaaat
1801 ctccattaat taaaaaatca atcattcatt attagaatca tagcattgtc cattaagata
1861 catattttca gactacctat tttaacacat gcctatcgtc aaataattag gatgacaatt
1921 atgatgtatt atgtaaaatt atgtaagatt atcttattat ggaagatttt gtaatatata
1981 tatggcaata aatataatac tgtaattgta ttataaatga agacatcttc gaaacttaaa
2041 atctcggtca tgttaaaaaa acgttattag tatattaaca cgctattcat atgatataca
2101 gataaaacag gtttaagtta gtaatgttct tgtgaatgtt ttctgtggta taaacaatca
2161 ctgtaatgat tttatttcgc gaatttaatg taacacagag aaataaaacc gttaccagtg
2221 aaatacttaa caaaaa
//