LOCUS LI512255 2217 bp mRNA linear TSA 12-MAR-2016
DEFINITION TSA: Lasius neglectus mRNA, contig: c32196.graph_c0_seq1.
ACCESSION LI512255
VERSION LI512255.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042123, DRR042124, DRR042125, DRR042126,
DRR042127, DRR042128
BioSample:SAMD00035781, SAMD00035782, SAMD00035783, SAMD00035784,
SAMD00035785, SAMD00035786
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Lasius neglectus
ORGANISM Lasius neglectus
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Formicinae; Lasius; Lasius.
REFERENCE 1 (bases 1 to 2217)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2217
/db_xref="taxon:111072"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c32196.graph_c0_seq1"
/organism="Lasius neglectus"
/tissue_type="whole body"
BASE COUNT 697 a 464 c 486 g 570 t
ORIGIN
1 gacaattgca gtggtatcaa cgcgtagtac atgggagttc tatacaagcg gctccgttga
61 acatattaat cggaagtatg gtgctcctcg cgagaatcgc caagtgcgag gcatggctta
121 ccactagatc ctacagtaat gctgctccga cggtcaaaat gtacattgat gggcaattca
181 tagaatcgaa gggcacagag ttcacggatg tccatgatcc agcgacgaat cagttgctat
241 gccgcactcc aaaatgcaca aaggacgaga tggagaatgc ggtgcagagt gcacggaatg
301 catacgagaa gtggcggcac acaagcgtgc taacgagaca aaatttgatg ctaaaatatc
361 aagctctcat ccgcgaacac tccgtcagtt tattaatgca ctttaaagcc taaattgaat
421 gttatactga ttaaataata tcgcgttcac aaaatggaaa agataataca ttacaaatta
481 taatacatta caagaaaatg ataatacatt acaaatgata atatattaca aatgtggatg
541 attaacgaat tttgcatcgg caaaatgaaa aatctggtat tattgcgaca gtagtaacga
601 acggtaaaat acggagaatg gaggacgtca actatcgaac aaatctttta ctactagcaa
661 tcagtgttca gtgaacattt tacattaaaa ctttatatct tattcattta tccacagaaa
721 gaaattgcgc aaaatcttgt gaaggaaaat ggaaagacta tggctgacgc agaaggagat
781 gtgcttcgag gtcttcaggt cgtcgatgcc tgcgcgtcaa tcccgacgct acaaatgggt
841 gaatccacgg ccaatattgc tacggacatg gacatcgtct cgtacaaagt tccccttggc
901 attaccgcgt ctatttgtcc cttcaacttt cctgccatga taccgctttg gtcgttcccg
961 atatcggtcg catgcgggaa cgccgcaatt ctgaagccat cggagcgggt accaggtgcg
1021 tccatgatcc tcgctgatct ctttacgaaa gccggtgcac cagctggcct tttaaacata
1081 atacacggcc agcacgcagc cgtggacttc atttgcgagc atcctgatat caaggccgtt
1141 tcctttgtcg gttctgatca agcgggtaaa tatatctaca agcagagcag tgcacatggt
1201 aagagggtac aatgcaatat gggtgctaag aatcactgca tcgtcttgcc ggacgcaaat
1261 aagaacaaga cgctgtcgca aattgccggt gcagctttcg gagccgccgg acaacgatgc
1321 atggcacttt cggtggccgt cttcgtaggc aaatctaaag aatggatacc tgaattagta
1381 gaggcagcaa agagattgaa ggtaaacgct ggtcacgtac ccggcactga tcttggacct
1441 gttatatcgc cgcaggcgaa gcagaaaatc tgcgagctgg tagaatccgg tgttaaagaa
1501 ggcgcgaaat tggctctcga cggaagagac atcattgtat ccggctatga aaatggaaac
1561 ttcgtcggac ctacggtctt aaccgatgtt aagcctatga tgaagtgtta tacgaacgaa
1621 atattcggac ccgttttatc atgcatgttc gccgacacta ccgatgaggc catcgacatc
1681 atcaataaaa atccttacgg caatggcacg gcagttttca cgacaaatgg cgcgacagcc
1741 agggcattcg tgaacagaat cgaagctggc caagttggcg ttaatgtacc cataccagtg
1801 cccctaccaa tgttcagctt tactggtaac aagggttcct tcctcggcga taaccatttt
1861 tatgggaaag acggtgtaaa tttccatacg caaacgaaga caataactca attatggaga
1921 tctagtgatg ctagcgatat agtatcatcg actgcgatgc ctacaatgca ataaagactg
1981 taattgtata taattgtaca atatagcaaa gtatcattca actgttttca aattttacaa
2041 atggtataaa gctcacttct gcaatttgtt atgcagttat aaacgatgtc ttccatttta
2101 ttacgtacaa atctgttact ataaatgaat gtattgttat aagctaaata aattacatat
2161 attttttata gcttaataaa gtatagccca tttctcttga aaaaaaaaaa aaaaaaa
//