LOCUS LI511389 2026 bp mRNA linear TSA 12-MAR-2016
DEFINITION TSA: Lasius neglectus mRNA, contig: c31271.graph_c1_seq3.
ACCESSION LI511389
VERSION LI511389.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042123, DRR042124, DRR042125, DRR042126,
DRR042127, DRR042128
BioSample:SAMD00035781, SAMD00035782, SAMD00035783, SAMD00035784,
SAMD00035785, SAMD00035786
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Lasius neglectus
ORGANISM Lasius neglectus
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Formicinae; Lasius; Lasius.
REFERENCE 1 (bases 1 to 2026)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2026
/db_xref="taxon:111072"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c31271.graph_c1_seq3"
/organism="Lasius neglectus"
/tissue_type="whole body"
BASE COUNT 528 a 448 c 471 g 579 t
ORIGIN
1 gggagtaagg aaggactctc gaccgtgcgt tcgaaggcaa gccgaagctg acgtcatgcg
61 cgacgataat attcacgtta cggacaattg tccggtttgt ttgaagtata attgttactt
121 ttctaaatgc tacgacgata cggacgtagc caggagatgt atcgacgtta agcgtcgata
181 tcacagacgt ttgtccgata tcggagaatg ctgctgtatt tgtagaccgt tcgatgctcg
241 agaggaagcg acggtgtcat tattacaatc aaagatcaga aatcttcaga aagctagaga
301 aaaattgtgc gttactgaac ctatgatgga catcgaggaa agcgatccga gttgcgagta
361 tactcgggat cactcgcgag gctacgagtt ctacaaggat ctagaaaaat tttataaaag
421 gatgtacaag caagcgaaat tatgcgcgcg ggaggtcgac ggttgatgtc gagagaaatt
481 gtcgtcgttt aaattttttc tacacagatt tttgtattac aaaaattttt taagacaatg
541 tcgatcgcaa acgttttata tacacgatgt tcaacgaaag aatctcactg ggagaagact
601 agttgtgatt aattaaaata attaaccgat gtaagctgtg tgtacaagtg tgtgttgata
661 gaaagtgttc aaatggttaa catttcttca gagatgttgt gtaatagaga tacgagtaca
721 atacacgctg tgttcatttc tttatcaaac tagcagttta tttcttcacc ataaaagtgg
781 agaaataaaa gtaaaggaga aattgattgc atatgtaaca tgtggagctg cgaggagtat
841 ttggaatata tctatgtaca aaataagcgt aaaaactatt ccttctcctt cacattttgt
901 acgcttgacg cccgtctcta taagtcggcg cgtccgcgac tcgaatccca cgtagagcga
961 cggacttctt caggagcgcc ggcgttctga gatgtaagcc gcgtccctgc ggagtccagg
1021 cccttaacga gacgcgttcg tcttcttcac cggtgatcgc gatccatccc gcgctggata
1081 gaacaacatc ggcggccgat tcgttcttcc cgataccgat gacttccatc tccttggatc
1141 ctaatgcagg ccaatgtttc agtcggtccg gattgctctc gggtacgacg aacgcttccg
1201 ttttgagcaa ctcgttgtat atactgtccg cgtccgcagt gttggttata gtgatcggca
1261 attccctgct cgagaatatc gtgcacctga tgaagctatc gccctccagg taatccagtc
1321 tgccgattcc agccaaaaat atcgtctgat ctgcttgtag aaggaacgtt ctaggtgaga
1381 ttatcctcgt cggtaagact gacaagagtt ccggtgtcgt tagcagatcc aaaatctgat
1441 ctggttgaat ggtgcccggg gtgtcgtaac accagcggct gtacttatac tcctccttag
1501 tttcgtcaaa gccgaattgt tgcctgcatt tttcctccaa gaacacatcg ttctgcgccg
1561 ccatttggga tttcgattga aacgttctac caatgtgact ttgcaatgta gcgtatttta
1621 agttacgcgt cgttttgaat tgattgttcc tcaacatctc ttcagctcgt ttgtactgtt
1681 gttccttttt cagtcgcaac actctcaaat aaagcctcca cttgagggga ttcaaaatag
1741 gaaatttcag caagttcaaa gttgtgcccg gccagggcga gatggtcgcg cgttgtatga
1801 gatccacagc ctttaccttg caataatcgg actgcagcaa cgcattgaac agcgaggact
1861 tgcccacgtt tgtgcatcca atgacataaa cgtctccctt gtatttccac agactatgta
1921 acttatttat cagttcctct acgccgtagc cggttttcgc ggatacgagc gcgatgtgtc
1981 tgatcctctc cttctggatt cccgtacctt ccacagcctt cgacag
//